Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2642 | 8149;8150;8151 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
N2AB | 2642 | 8149;8150;8151 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
N2A | 2642 | 8149;8150;8151 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
N2B | 2596 | 8011;8012;8013 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
Novex-1 | 2596 | 8011;8012;8013 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
Novex-2 | 2596 | 8011;8012;8013 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
Novex-3 | 2642 | 8149;8150;8151 | chr2:178771403;178771402;178771401 | chr2:179636130;179636129;179636128 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | D | 0.748 | 0.581 | 0.527251791467 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
E/K | None | None | 0.992 | D | 0.509 | 0.426 | 0.377097596864 | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85734E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2402 | likely_benign | 0.2514 | benign | -0.714 | Destabilizing | 0.996 | D | 0.605 | neutral | D | 0.614432328 | None | None | N |
E/C | 0.9181 | likely_pathogenic | 0.9164 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/D | 0.3367 | likely_benign | 0.361 | ambiguous | -1.362 | Destabilizing | 0.998 | D | 0.453 | neutral | D | 0.642114925 | None | None | N |
E/F | 0.8203 | likely_pathogenic | 0.8354 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/G | 0.4097 | ambiguous | 0.4359 | ambiguous | -1.054 | Destabilizing | 0.999 | D | 0.748 | deleterious | D | 0.578590162 | None | None | N |
E/H | 0.6185 | likely_pathogenic | 0.616 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/I | 0.365 | ambiguous | 0.3802 | ambiguous | 0.203 | Stabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
E/K | 0.1957 | likely_benign | 0.2085 | benign | -1.028 | Destabilizing | 0.992 | D | 0.509 | neutral | D | 0.557828307 | None | None | N |
E/L | 0.5018 | ambiguous | 0.5207 | ambiguous | 0.203 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/M | 0.5025 | ambiguous | 0.5115 | ambiguous | 0.688 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/N | 0.4908 | ambiguous | 0.5258 | ambiguous | -1.233 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/P | 0.9797 | likely_pathogenic | 0.9804 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/Q | 0.1797 | likely_benign | 0.1864 | benign | -1.089 | Destabilizing | 0.957 | D | 0.224 | neutral | N | 0.502125148 | None | None | N |
E/R | 0.351 | ambiguous | 0.368 | ambiguous | -0.958 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/S | 0.35 | ambiguous | 0.3707 | ambiguous | -1.608 | Destabilizing | 0.997 | D | 0.547 | neutral | None | None | None | None | N |
E/T | 0.2985 | likely_benign | 0.3201 | benign | -1.331 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/V | 0.2382 | likely_benign | 0.2451 | benign | -0.081 | Destabilizing | 0.999 | D | 0.807 | deleterious | D | 0.588195356 | None | None | N |
E/W | 0.9353 | likely_pathogenic | 0.9374 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Y | 0.7575 | likely_pathogenic | 0.7682 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.