Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26420 | 79483;79484;79485 | chr2:178566874;178566873;178566872 | chr2:179431601;179431600;179431599 |
N2AB | 24779 | 74560;74561;74562 | chr2:178566874;178566873;178566872 | chr2:179431601;179431600;179431599 |
N2A | 23852 | 71779;71780;71781 | chr2:178566874;178566873;178566872 | chr2:179431601;179431600;179431599 |
N2B | 17355 | 52288;52289;52290 | chr2:178566874;178566873;178566872 | chr2:179431601;179431600;179431599 |
Novex-1 | 17480 | 52663;52664;52665 | chr2:178566874;178566873;178566872 | chr2:179431601;179431600;179431599 |
Novex-2 | 17547 | 52864;52865;52866 | chr2:178566874;178566873;178566872 | chr2:179431601;179431600;179431599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 1.0 | D | 0.804 | 0.557 | 0.66885242914 | gnomAD-4.0.0 | 1.59187E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85907E-06 | 0 | 0 |
G/D | None | None | 1.0 | N | 0.839 | 0.601 | 0.398283496042 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3978 | ambiguous | 0.373 | ambiguous | -0.677 | Destabilizing | 1.0 | D | 0.596 | neutral | N | 0.504862405 | None | None | N |
G/C | 0.5134 | ambiguous | 0.4707 | ambiguous | -0.767 | Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.522436909 | None | None | N |
G/D | 0.9013 | likely_pathogenic | 0.8876 | pathogenic | -1.685 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.513015933 | None | None | N |
G/E | 0.9399 | likely_pathogenic | 0.9261 | pathogenic | -1.604 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
G/F | 0.944 | likely_pathogenic | 0.9342 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/H | 0.8878 | likely_pathogenic | 0.867 | pathogenic | -1.594 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/I | 0.9502 | likely_pathogenic | 0.9334 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/K | 0.9866 | likely_pathogenic | 0.9855 | pathogenic | -1.107 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
G/L | 0.9395 | likely_pathogenic | 0.9218 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
G/M | 0.9482 | likely_pathogenic | 0.9326 | pathogenic | -0.053 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/N | 0.7094 | likely_pathogenic | 0.5672 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/P | 0.9991 | likely_pathogenic | 0.9983 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
G/Q | 0.9217 | likely_pathogenic | 0.8972 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/R | 0.9493 | likely_pathogenic | 0.9446 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.878 | deleterious | N | 0.509444308 | None | None | N |
G/S | 0.2315 | likely_benign | 0.197 | benign | -1.363 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.480539952 | None | None | N |
G/T | 0.6724 | likely_pathogenic | 0.6148 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
G/V | 0.8905 | likely_pathogenic | 0.8677 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.537463291 | None | None | N |
G/W | 0.8918 | likely_pathogenic | 0.8748 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
G/Y | 0.8836 | likely_pathogenic | 0.8522 | pathogenic | -0.791 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.