Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26422 | 79489;79490;79491 | chr2:178566868;178566867;178566866 | chr2:179431595;179431594;179431593 |
N2AB | 24781 | 74566;74567;74568 | chr2:178566868;178566867;178566866 | chr2:179431595;179431594;179431593 |
N2A | 23854 | 71785;71786;71787 | chr2:178566868;178566867;178566866 | chr2:179431595;179431594;179431593 |
N2B | 17357 | 52294;52295;52296 | chr2:178566868;178566867;178566866 | chr2:179431595;179431594;179431593 |
Novex-1 | 17482 | 52669;52670;52671 | chr2:178566868;178566867;178566866 | chr2:179431595;179431594;179431593 |
Novex-2 | 17549 | 52870;52871;52872 | chr2:178566868;178566867;178566866 | chr2:179431595;179431594;179431593 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1553590996 | None | 0.63 | N | 0.479 | 0.207 | 0.559156356702 | gnomAD-4.0.0 | 2.73732E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.00939E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs3731745 | -2.683 | 0.983 | N | 0.671 | 0.404 | None | gnomAD-2.1.1 | 2.57346E-02 | None | None | None | None | N | None | 4.85155E-03 | 3.35052E-02 | None | 1.46289E-02 | 6.12056E-02 | None | 6.04733E-03 | None | 4.7937E-02 | 2.33536E-02 | 2.65748E-02 |
I/T | rs3731745 | -2.683 | 0.983 | N | 0.671 | 0.404 | None | gnomAD-3.1.2 | 2.023E-02 | None | None | None | None | N | None | 4.49189E-03 | 2.19131E-02 | 3.07018E-02 | 1.90311E-02 | 6.10465E-02 | None | 4.45974E-02 | 6.32911E-03 | 2.3392E-02 | 8.28844E-03 | 1.95985E-02 |
I/T | rs3731745 | -2.683 | 0.983 | N | 0.671 | 0.404 | None | 1000 genomes | 2.23642E-02 | None | None | None | None | N | None | 8E-04 | 2.45E-02 | None | None | 6.05E-02 | 2.68E-02 | None | None | None | 6.1E-03 | None |
I/T | rs3731745 | -2.683 | 0.983 | N | 0.671 | 0.404 | None | gnomAD-4.0.0 | 2.28872E-02 | None | None | None | None | N | None | 4.29448E-03 | 2.94029E-02 | None | 1.48689E-02 | 6.3117E-02 | None | 4.77173E-02 | 9.89772E-03 | 2.24368E-02 | 6.71981E-03 | 2.17106E-02 |
I/V | rs1553590996 | None | 0.598 | N | 0.487 | 0.143 | 0.513337797588 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.3113E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1553590996 | None | 0.598 | N | 0.487 | 0.143 | 0.513337797588 | gnomAD-4.0.0 | 2.47925E-06 | None | None | None | None | N | None | 0 | 3.336E-05 | None | 0 | 0 | None | 0 | 0 | 1.69539E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4101 | ambiguous | 0.4148 | ambiguous | -2.258 | Highly Destabilizing | 0.916 | D | 0.602 | neutral | None | None | None | None | N |
I/C | 0.699 | likely_pathogenic | 0.7037 | pathogenic | -1.503 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
I/D | 0.9127 | likely_pathogenic | 0.9272 | pathogenic | -1.999 | Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | N |
I/E | 0.8524 | likely_pathogenic | 0.8642 | pathogenic | -1.901 | Destabilizing | 0.987 | D | 0.755 | deleterious | None | None | None | None | N |
I/F | 0.1533 | likely_benign | 0.1627 | benign | -1.432 | Destabilizing | 0.805 | D | 0.615 | neutral | N | 0.472583326 | None | None | N |
I/G | 0.8204 | likely_pathogenic | 0.8399 | pathogenic | -2.687 | Highly Destabilizing | 0.987 | D | 0.743 | deleterious | None | None | None | None | N |
I/H | 0.5572 | ambiguous | 0.589 | pathogenic | -1.858 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
I/K | 0.7801 | likely_pathogenic | 0.7935 | pathogenic | -1.668 | Destabilizing | 0.987 | D | 0.758 | deleterious | None | None | None | None | N |
I/L | 0.1378 | likely_benign | 0.1565 | benign | -1.089 | Destabilizing | 0.63 | D | 0.479 | neutral | N | 0.520537672 | None | None | N |
I/M | 0.1173 | likely_benign | 0.1223 | benign | -0.898 | Destabilizing | 0.994 | D | 0.679 | prob.neutral | N | 0.485852189 | None | None | N |
I/N | 0.4713 | ambiguous | 0.5046 | ambiguous | -1.667 | Destabilizing | 0.983 | D | 0.78 | deleterious | N | 0.47245474 | None | None | N |
I/P | 0.9872 | likely_pathogenic | 0.9889 | pathogenic | -1.453 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
I/Q | 0.6847 | likely_pathogenic | 0.7004 | pathogenic | -1.75 | Destabilizing | 0.987 | D | 0.787 | deleterious | None | None | None | None | N |
I/R | 0.6491 | likely_pathogenic | 0.6531 | pathogenic | -1.099 | Destabilizing | 0.987 | D | 0.785 | deleterious | None | None | None | None | N |
I/S | 0.409 | ambiguous | 0.4277 | ambiguous | -2.369 | Highly Destabilizing | 0.983 | D | 0.681 | prob.neutral | N | 0.479910252 | None | None | N |
I/T | 0.2075 | likely_benign | 0.1993 | benign | -2.148 | Highly Destabilizing | 0.983 | D | 0.671 | neutral | N | 0.511571472 | None | None | N |
I/V | 0.0737 | likely_benign | 0.0733 | benign | -1.453 | Destabilizing | 0.598 | D | 0.487 | neutral | N | 0.450043011 | None | None | N |
I/W | 0.7228 | likely_pathogenic | 0.7479 | pathogenic | -1.613 | Destabilizing | 0.997 | D | 0.767 | deleterious | None | None | None | None | N |
I/Y | 0.5124 | ambiguous | 0.5321 | ambiguous | -1.388 | Destabilizing | 0.033 | N | 0.501 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.