Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26426 | 79501;79502;79503 | chr2:178566856;178566855;178566854 | chr2:179431583;179431582;179431581 |
N2AB | 24785 | 74578;74579;74580 | chr2:178566856;178566855;178566854 | chr2:179431583;179431582;179431581 |
N2A | 23858 | 71797;71798;71799 | chr2:178566856;178566855;178566854 | chr2:179431583;179431582;179431581 |
N2B | 17361 | 52306;52307;52308 | chr2:178566856;178566855;178566854 | chr2:179431583;179431582;179431581 |
Novex-1 | 17486 | 52681;52682;52683 | chr2:178566856;178566855;178566854 | chr2:179431583;179431582;179431581 |
Novex-2 | 17553 | 52882;52883;52884 | chr2:178566856;178566855;178566854 | chr2:179431583;179431582;179431581 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.983 | D | 0.797 | 0.506 | 0.596373027241 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9809 | likely_pathogenic | 0.9798 | pathogenic | -2.047 | Highly Destabilizing | 0.845 | D | 0.543 | neutral | None | None | None | None | N |
R/C | 0.6088 | likely_pathogenic | 0.6162 | pathogenic | -1.852 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
R/D | 0.9976 | likely_pathogenic | 0.9971 | pathogenic | -1.046 | Destabilizing | 0.975 | D | 0.777 | deleterious | None | None | None | None | N |
R/E | 0.9732 | likely_pathogenic | 0.9683 | pathogenic | -0.823 | Destabilizing | 0.845 | D | 0.449 | neutral | None | None | None | None | N |
R/F | 0.9844 | likely_pathogenic | 0.9764 | pathogenic | -1.186 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
R/G | 0.9669 | likely_pathogenic | 0.9645 | pathogenic | -2.39 | Highly Destabilizing | 0.892 | D | 0.683 | prob.neutral | N | 0.516379614 | None | None | N |
R/H | 0.353 | ambiguous | 0.3137 | benign | -2.13 | Highly Destabilizing | 0.987 | D | 0.607 | neutral | None | None | None | None | N |
R/I | 0.9638 | likely_pathogenic | 0.9572 | pathogenic | -1.041 | Destabilizing | 0.983 | D | 0.797 | deleterious | D | 0.548055447 | None | None | N |
R/K | 0.2908 | likely_benign | 0.2713 | benign | -1.247 | Destabilizing | 0.025 | N | 0.221 | neutral | N | 0.498951679 | None | None | N |
R/L | 0.9059 | likely_pathogenic | 0.901 | pathogenic | -1.041 | Destabilizing | 0.916 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/M | 0.939 | likely_pathogenic | 0.9293 | pathogenic | -1.536 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
R/N | 0.9865 | likely_pathogenic | 0.983 | pathogenic | -1.338 | Destabilizing | 0.975 | D | 0.578 | neutral | None | None | None | None | N |
R/P | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.367 | Destabilizing | 0.987 | D | 0.793 | deleterious | None | None | None | None | N |
R/Q | 0.4529 | ambiguous | 0.4458 | ambiguous | -1.181 | Destabilizing | 0.975 | D | 0.565 | neutral | None | None | None | None | N |
R/S | 0.9913 | likely_pathogenic | 0.99 | pathogenic | -2.216 | Highly Destabilizing | 0.892 | D | 0.656 | neutral | N | 0.479104239 | None | None | N |
R/T | 0.9814 | likely_pathogenic | 0.9808 | pathogenic | -1.781 | Destabilizing | 0.967 | D | 0.737 | prob.delet. | N | 0.521303911 | None | None | N |
R/V | 0.9694 | likely_pathogenic | 0.9666 | pathogenic | -1.367 | Destabilizing | 0.975 | D | 0.789 | deleterious | None | None | None | None | N |
R/W | 0.7982 | likely_pathogenic | 0.7645 | pathogenic | -0.699 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
R/Y | 0.9315 | likely_pathogenic | 0.8992 | pathogenic | -0.589 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.