Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26429 | 79510;79511;79512 | chr2:178566847;178566846;178566845 | chr2:179431574;179431573;179431572 |
N2AB | 24788 | 74587;74588;74589 | chr2:178566847;178566846;178566845 | chr2:179431574;179431573;179431572 |
N2A | 23861 | 71806;71807;71808 | chr2:178566847;178566846;178566845 | chr2:179431574;179431573;179431572 |
N2B | 17364 | 52315;52316;52317 | chr2:178566847;178566846;178566845 | chr2:179431574;179431573;179431572 |
Novex-1 | 17489 | 52690;52691;52692 | chr2:178566847;178566846;178566845 | chr2:179431574;179431573;179431572 |
Novex-2 | 17556 | 52891;52892;52893 | chr2:178566847;178566846;178566845 | chr2:179431574;179431573;179431572 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.491 | N | 0.24 | 0.092 | 0.16115917748 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/R | None | None | 0.491 | N | 0.278 | 0.174 | 0.216624796971 | gnomAD-4.0.0 | 1.59205E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.063 | likely_benign | 0.055 | benign | -0.166 | Destabilizing | 0.001 | N | 0.104 | neutral | None | None | None | None | I |
S/C | 0.1138 | likely_benign | 0.0977 | benign | -0.274 | Destabilizing | 0.873 | D | 0.215 | neutral | N | 0.467547351 | None | None | I |
S/D | 0.4586 | ambiguous | 0.3645 | ambiguous | -0.031 | Destabilizing | 0.002 | N | 0.096 | neutral | None | None | None | None | I |
S/E | 0.5454 | ambiguous | 0.4478 | ambiguous | -0.139 | Destabilizing | 0.209 | N | 0.246 | neutral | None | None | None | None | I |
S/F | 0.2239 | likely_benign | 0.1654 | benign | -0.896 | Destabilizing | 0.901 | D | 0.297 | neutral | None | None | None | None | I |
S/G | 0.0804 | likely_benign | 0.072 | benign | -0.218 | Destabilizing | 0.08 | N | 0.194 | neutral | N | 0.407732241 | None | None | I |
S/H | 0.3609 | ambiguous | 0.3018 | benign | -0.544 | Destabilizing | 0.004 | N | 0.224 | neutral | None | None | None | None | I |
S/I | 0.1932 | likely_benign | 0.14 | benign | -0.161 | Destabilizing | 0.491 | N | 0.296 | neutral | N | 0.507072516 | None | None | I |
S/K | 0.6624 | likely_pathogenic | 0.5538 | ambiguous | -0.396 | Destabilizing | 0.345 | N | 0.199 | neutral | None | None | None | None | I |
S/L | 0.0858 | likely_benign | 0.071 | benign | -0.161 | Destabilizing | 0.345 | N | 0.279 | neutral | None | None | None | None | I |
S/M | 0.159 | likely_benign | 0.1318 | benign | -0.116 | Destabilizing | 0.965 | D | 0.218 | neutral | None | None | None | None | I |
S/N | 0.1284 | likely_benign | 0.1034 | benign | -0.077 | Destabilizing | 0.491 | N | 0.24 | neutral | N | 0.428376872 | None | None | I |
S/P | 0.4669 | ambiguous | 0.3912 | ambiguous | -0.138 | Destabilizing | 0.722 | D | 0.282 | neutral | None | None | None | None | I |
S/Q | 0.4544 | ambiguous | 0.3856 | ambiguous | -0.316 | Destabilizing | 0.561 | D | 0.191 | neutral | None | None | None | None | I |
S/R | 0.6228 | likely_pathogenic | 0.5124 | ambiguous | -0.118 | Destabilizing | 0.491 | N | 0.278 | neutral | N | 0.466897975 | None | None | I |
S/T | 0.0751 | likely_benign | 0.0671 | benign | -0.186 | Destabilizing | 0.285 | N | 0.32 | neutral | N | 0.443906472 | None | None | I |
S/V | 0.1731 | likely_benign | 0.1318 | benign | -0.138 | Destabilizing | 0.39 | N | 0.28 | neutral | None | None | None | None | I |
S/W | 0.3887 | ambiguous | 0.3199 | benign | -0.986 | Destabilizing | 0.991 | D | 0.283 | neutral | None | None | None | None | I |
S/Y | 0.233 | likely_benign | 0.168 | benign | -0.672 | Destabilizing | 0.692 | D | 0.309 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.