Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2643 | 8152;8153;8154 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
N2AB | 2643 | 8152;8153;8154 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
N2A | 2643 | 8152;8153;8154 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
N2B | 2597 | 8014;8015;8016 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
Novex-1 | 2597 | 8014;8015;8016 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
Novex-2 | 2597 | 8014;8015;8016 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
Novex-3 | 2643 | 8152;8153;8154 | chr2:178771400;178771399;178771398 | chr2:179636127;179636126;179636125 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs886042338 | -1.526 | 1.0 | D | 0.832 | 0.621 | 0.782848552693 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
V/F | rs886042338 | -1.526 | 1.0 | D | 0.832 | 0.621 | 0.782848552693 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5937 | likely_pathogenic | 0.5888 | pathogenic | -2.099 | Highly Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.527303492 | None | None | N |
V/C | 0.971 | likely_pathogenic | 0.9723 | pathogenic | -2.163 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
V/D | 0.9483 | likely_pathogenic | 0.9497 | pathogenic | -3.475 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.763675296 | None | None | N |
V/E | 0.9029 | likely_pathogenic | 0.9104 | pathogenic | -3.323 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/F | 0.711 | likely_pathogenic | 0.7096 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.832 | deleterious | D | 0.610564112 | None | None | N |
V/G | 0.7199 | likely_pathogenic | 0.7087 | pathogenic | -2.533 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | D | 0.763675296 | None | None | N |
V/H | 0.9863 | likely_pathogenic | 0.9868 | pathogenic | -2.178 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/I | 0.1293 | likely_benign | 0.1347 | benign | -0.902 | Destabilizing | 0.997 | D | 0.529 | neutral | D | 0.547719177 | None | None | N |
V/K | 0.9635 | likely_pathogenic | 0.9646 | pathogenic | -1.899 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/L | 0.5553 | ambiguous | 0.5569 | ambiguous | -0.902 | Destabilizing | 0.997 | D | 0.602 | neutral | N | 0.520659141 | None | None | N |
V/M | 0.5438 | ambiguous | 0.5613 | ambiguous | -1.125 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
V/N | 0.922 | likely_pathogenic | 0.9278 | pathogenic | -2.277 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/P | 0.9746 | likely_pathogenic | 0.9728 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/Q | 0.9536 | likely_pathogenic | 0.9565 | pathogenic | -2.218 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/R | 0.9467 | likely_pathogenic | 0.9481 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/S | 0.8256 | likely_pathogenic | 0.8311 | pathogenic | -2.709 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/T | 0.5135 | ambiguous | 0.5191 | ambiguous | -2.443 | Highly Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
V/W | 0.9916 | likely_pathogenic | 0.9923 | pathogenic | -1.768 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/Y | 0.9617 | likely_pathogenic | 0.9631 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.