Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26431 | 79516;79517;79518 | chr2:178566841;178566840;178566839 | chr2:179431568;179431567;179431566 |
N2AB | 24790 | 74593;74594;74595 | chr2:178566841;178566840;178566839 | chr2:179431568;179431567;179431566 |
N2A | 23863 | 71812;71813;71814 | chr2:178566841;178566840;178566839 | chr2:179431568;179431567;179431566 |
N2B | 17366 | 52321;52322;52323 | chr2:178566841;178566840;178566839 | chr2:179431568;179431567;179431566 |
Novex-1 | 17491 | 52696;52697;52698 | chr2:178566841;178566840;178566839 | chr2:179431568;179431567;179431566 |
Novex-2 | 17558 | 52897;52898;52899 | chr2:178566841;178566840;178566839 | chr2:179431568;179431567;179431566 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.967 | N | 0.651 | 0.229 | 0.516437024119 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62503E-06 | 0 | 0 |
I/N | None | None | 0.994 | N | 0.668 | 0.529 | 0.72833840645 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6631 | likely_pathogenic | 0.5387 | ambiguous | -0.533 | Destabilizing | 0.845 | D | 0.609 | neutral | None | None | None | None | I |
I/C | 0.802 | likely_pathogenic | 0.7459 | pathogenic | -0.975 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | I |
I/D | 0.9283 | likely_pathogenic | 0.9061 | pathogenic | -0.122 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | I |
I/E | 0.8701 | likely_pathogenic | 0.8334 | pathogenic | -0.204 | Destabilizing | 0.987 | D | 0.665 | neutral | None | None | None | None | I |
I/F | 0.282 | likely_benign | 0.2209 | benign | -0.686 | Destabilizing | 0.967 | D | 0.651 | neutral | N | 0.512419621 | None | None | I |
I/G | 0.8107 | likely_pathogenic | 0.7276 | pathogenic | -0.606 | Destabilizing | 0.987 | D | 0.663 | neutral | None | None | None | None | I |
I/H | 0.7873 | likely_pathogenic | 0.7486 | pathogenic | -0.011 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
I/K | 0.7642 | likely_pathogenic | 0.7206 | pathogenic | -0.419 | Destabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | I |
I/L | 0.1367 | likely_benign | 0.1165 | benign | -0.448 | Destabilizing | 0.426 | N | 0.553 | neutral | N | 0.397883394 | None | None | I |
I/M | 0.1599 | likely_benign | 0.1189 | benign | -0.75 | Destabilizing | 0.983 | D | 0.648 | neutral | N | 0.431361249 | None | None | I |
I/N | 0.5296 | ambiguous | 0.4496 | ambiguous | -0.337 | Destabilizing | 0.994 | D | 0.668 | neutral | N | 0.435380203 | None | None | I |
I/P | 0.8068 | likely_pathogenic | 0.7914 | pathogenic | -0.452 | Destabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | I |
I/Q | 0.7088 | likely_pathogenic | 0.6566 | pathogenic | -0.463 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | I |
I/R | 0.7107 | likely_pathogenic | 0.668 | pathogenic | -0.032 | Destabilizing | 0.987 | D | 0.665 | neutral | None | None | None | None | I |
I/S | 0.5666 | likely_pathogenic | 0.4862 | ambiguous | -0.738 | Destabilizing | 0.983 | D | 0.619 | neutral | N | 0.430859817 | None | None | I |
I/T | 0.5656 | likely_pathogenic | 0.4499 | ambiguous | -0.725 | Destabilizing | 0.892 | D | 0.595 | neutral | N | 0.413620851 | None | None | I |
I/V | 0.1053 | likely_benign | 0.0839 | benign | -0.452 | Destabilizing | 0.011 | N | 0.371 | neutral | N | 0.397344676 | None | None | I |
I/W | 0.8809 | likely_pathogenic | 0.8516 | pathogenic | -0.69 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
I/Y | 0.7095 | likely_pathogenic | 0.6597 | pathogenic | -0.493 | Destabilizing | 0.987 | D | 0.647 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.