Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26434 | 79525;79526;79527 | chr2:178566832;178566831;178566830 | chr2:179431559;179431558;179431557 |
N2AB | 24793 | 74602;74603;74604 | chr2:178566832;178566831;178566830 | chr2:179431559;179431558;179431557 |
N2A | 23866 | 71821;71822;71823 | chr2:178566832;178566831;178566830 | chr2:179431559;179431558;179431557 |
N2B | 17369 | 52330;52331;52332 | chr2:178566832;178566831;178566830 | chr2:179431559;179431558;179431557 |
Novex-1 | 17494 | 52705;52706;52707 | chr2:178566832;178566831;178566830 | chr2:179431559;179431558;179431557 |
Novex-2 | 17561 | 52906;52907;52908 | chr2:178566832;178566831;178566830 | chr2:179431559;179431558;179431557 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | None | N | 0.181 | 0.156 | 0.536661227952 | gnomAD-4.0.0 | 3.18402E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77809E-05 | None | 0 | 0 | 2.85889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5268 | ambiguous | 0.4812 | ambiguous | -1.27 | Destabilizing | 0.025 | N | 0.249 | neutral | None | None | None | None | I |
I/C | 0.7512 | likely_pathogenic | 0.6979 | pathogenic | -0.722 | Destabilizing | 0.667 | D | 0.311 | neutral | None | None | None | None | I |
I/D | 0.9456 | likely_pathogenic | 0.9497 | pathogenic | -0.848 | Destabilizing | 0.22 | N | 0.343 | neutral | None | None | None | None | I |
I/E | 0.8647 | likely_pathogenic | 0.884 | pathogenic | -0.87 | Destabilizing | 0.22 | N | 0.299 | neutral | None | None | None | None | I |
I/F | 0.3017 | likely_benign | 0.2895 | benign | -0.873 | Destabilizing | 0.22 | N | 0.277 | neutral | None | None | None | None | I |
I/G | 0.7536 | likely_pathogenic | 0.7176 | pathogenic | -1.541 | Destabilizing | 0.22 | N | 0.308 | neutral | None | None | None | None | I |
I/H | 0.7286 | likely_pathogenic | 0.7493 | pathogenic | -0.676 | Destabilizing | 0.958 | D | 0.32 | neutral | None | None | None | None | I |
I/K | 0.7833 | likely_pathogenic | 0.8145 | pathogenic | -0.91 | Destabilizing | 0.175 | N | 0.293 | neutral | N | 0.456640909 | None | None | I |
I/L | 0.1559 | likely_benign | 0.156 | benign | -0.621 | Destabilizing | 0.008 | N | 0.164 | neutral | N | 0.476440178 | None | None | I |
I/M | 0.1079 | likely_benign | 0.0927 | benign | -0.533 | Destabilizing | 0.427 | N | 0.328 | neutral | N | 0.477018968 | None | None | I |
I/N | 0.3846 | ambiguous | 0.3804 | ambiguous | -0.724 | Destabilizing | 0.22 | N | 0.337 | neutral | None | None | None | None | I |
I/P | 0.966 | likely_pathogenic | 0.9705 | pathogenic | -0.806 | Destabilizing | 0.364 | N | 0.376 | neutral | None | None | None | None | I |
I/Q | 0.6188 | likely_pathogenic | 0.6426 | pathogenic | -0.918 | Destabilizing | 0.667 | D | 0.363 | neutral | None | None | None | None | I |
I/R | 0.7348 | likely_pathogenic | 0.7704 | pathogenic | -0.268 | Destabilizing | 0.602 | D | 0.379 | neutral | N | 0.467820695 | None | None | I |
I/S | 0.4247 | ambiguous | 0.402 | ambiguous | -1.234 | Destabilizing | 0.055 | N | 0.281 | neutral | None | None | None | None | I |
I/T | 0.2393 | likely_benign | 0.2268 | benign | -1.149 | Destabilizing | None | N | 0.181 | neutral | N | 0.38216458 | None | None | I |
I/V | 0.1 | likely_benign | 0.084 | benign | -0.806 | Destabilizing | None | N | 0.126 | neutral | N | 0.387031682 | None | None | I |
I/W | 0.8831 | likely_pathogenic | 0.892 | pathogenic | -0.931 | Destabilizing | 0.958 | D | 0.349 | neutral | None | None | None | None | I |
I/Y | 0.6628 | likely_pathogenic | 0.6898 | pathogenic | -0.718 | Destabilizing | 0.667 | D | 0.349 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.