Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26436 | 79531;79532;79533 | chr2:178566826;178566825;178566824 | chr2:179431553;179431552;179431551 |
N2AB | 24795 | 74608;74609;74610 | chr2:178566826;178566825;178566824 | chr2:179431553;179431552;179431551 |
N2A | 23868 | 71827;71828;71829 | chr2:178566826;178566825;178566824 | chr2:179431553;179431552;179431551 |
N2B | 17371 | 52336;52337;52338 | chr2:178566826;178566825;178566824 | chr2:179431553;179431552;179431551 |
Novex-1 | 17496 | 52711;52712;52713 | chr2:178566826;178566825;178566824 | chr2:179431553;179431552;179431551 |
Novex-2 | 17563 | 52912;52913;52914 | chr2:178566826;178566825;178566824 | chr2:179431553;179431552;179431551 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.97 | N | 0.803 | 0.525 | 0.783465323079 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
C/Y | None | None | 0.97 | N | 0.777 | 0.546 | 0.661029647469 | gnomAD-4.0.0 | 2.7375E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 0 | 1.15937E-05 | 3.31422E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7099 | likely_pathogenic | 0.7039 | pathogenic | -1.567 | Destabilizing | 0.559 | D | 0.475 | neutral | None | None | None | None | N |
C/D | 0.9974 | likely_pathogenic | 0.9981 | pathogenic | -0.123 | Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | N |
C/E | 0.9979 | likely_pathogenic | 0.9984 | pathogenic | -0.03 | Destabilizing | 0.978 | D | 0.805 | deleterious | None | None | None | None | N |
C/F | 0.9057 | likely_pathogenic | 0.9334 | pathogenic | -0.944 | Destabilizing | 0.942 | D | 0.769 | deleterious | N | 0.473642828 | None | None | N |
C/G | 0.6881 | likely_pathogenic | 0.716 | pathogenic | -1.865 | Destabilizing | 0.97 | D | 0.736 | prob.delet. | N | 0.499054918 | None | None | N |
C/H | 0.9873 | likely_pathogenic | 0.9923 | pathogenic | -1.794 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
C/I | 0.8109 | likely_pathogenic | 0.7992 | pathogenic | -0.809 | Destabilizing | 0.754 | D | 0.52 | neutral | None | None | None | None | N |
C/K | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -0.849 | Destabilizing | 0.978 | D | 0.783 | deleterious | None | None | None | None | N |
C/L | 0.8855 | likely_pathogenic | 0.8956 | pathogenic | -0.809 | Destabilizing | 0.559 | D | 0.54 | neutral | None | None | None | None | N |
C/M | 0.9328 | likely_pathogenic | 0.9377 | pathogenic | 0.067 | Stabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | N |
C/N | 0.9675 | likely_pathogenic | 0.9736 | pathogenic | -0.835 | Destabilizing | 0.993 | D | 0.807 | deleterious | None | None | None | None | N |
C/P | 0.9957 | likely_pathogenic | 0.9958 | pathogenic | -1.035 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
C/Q | 0.9906 | likely_pathogenic | 0.9931 | pathogenic | -0.729 | Destabilizing | 0.993 | D | 0.797 | deleterious | None | None | None | None | N |
C/R | 0.9904 | likely_pathogenic | 0.9931 | pathogenic | -0.688 | Destabilizing | 0.97 | D | 0.803 | deleterious | N | 0.520157687 | None | None | N |
C/S | 0.7574 | likely_pathogenic | 0.7669 | pathogenic | -1.385 | Destabilizing | 0.904 | D | 0.63 | neutral | N | 0.486684655 | None | None | N |
C/T | 0.8383 | likely_pathogenic | 0.8269 | pathogenic | -1.109 | Destabilizing | 0.86 | D | 0.585 | neutral | None | None | None | None | N |
C/V | 0.5604 | ambiguous | 0.5332 | ambiguous | -1.035 | Destabilizing | 0.019 | N | 0.367 | neutral | None | None | None | None | N |
C/W | 0.9836 | likely_pathogenic | 0.9895 | pathogenic | -0.929 | Destabilizing | 0.997 | D | 0.755 | deleterious | D | 0.522946071 | None | None | N |
C/Y | 0.9533 | likely_pathogenic | 0.9685 | pathogenic | -0.915 | Destabilizing | 0.97 | D | 0.777 | deleterious | N | 0.494927088 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.