Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26441 | 79546;79547;79548 | chr2:178566811;178566810;178566809 | chr2:179431538;179431537;179431536 |
N2AB | 24800 | 74623;74624;74625 | chr2:178566811;178566810;178566809 | chr2:179431538;179431537;179431536 |
N2A | 23873 | 71842;71843;71844 | chr2:178566811;178566810;178566809 | chr2:179431538;179431537;179431536 |
N2B | 17376 | 52351;52352;52353 | chr2:178566811;178566810;178566809 | chr2:179431538;179431537;179431536 |
Novex-1 | 17501 | 52726;52727;52728 | chr2:178566811;178566810;178566809 | chr2:179431538;179431537;179431536 |
Novex-2 | 17568 | 52927;52928;52929 | chr2:178566811;178566810;178566809 | chr2:179431538;179431537;179431536 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1305096924 | None | 0.001 | N | 0.167 | 0.04 | 0.303123707472 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1305096924 | None | 0.001 | N | 0.167 | 0.04 | 0.303123707472 | gnomAD-4.0.0 | 6.57341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47037E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7177 | likely_pathogenic | 0.7675 | pathogenic | -1.74 | Destabilizing | 0.415 | N | 0.468 | neutral | None | None | None | None | N |
I/C | 0.7835 | likely_pathogenic | 0.8157 | pathogenic | -1.099 | Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | N |
I/D | 0.979 | likely_pathogenic | 0.9875 | pathogenic | -0.916 | Destabilizing | 0.987 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/E | 0.9505 | likely_pathogenic | 0.967 | pathogenic | -0.818 | Destabilizing | 0.961 | D | 0.655 | neutral | None | None | None | None | N |
I/F | 0.5315 | ambiguous | 0.6378 | pathogenic | -1.022 | Destabilizing | 0.901 | D | 0.557 | neutral | N | 0.473241662 | None | None | N |
I/G | 0.9118 | likely_pathogenic | 0.939 | pathogenic | -2.158 | Highly Destabilizing | 0.961 | D | 0.633 | neutral | None | None | None | None | N |
I/H | 0.9199 | likely_pathogenic | 0.9536 | pathogenic | -1.432 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/K | 0.9202 | likely_pathogenic | 0.9473 | pathogenic | -1.014 | Destabilizing | 0.961 | D | 0.661 | neutral | None | None | None | None | N |
I/L | 0.1426 | likely_benign | 0.1798 | benign | -0.621 | Destabilizing | 0.19 | N | 0.285 | neutral | N | 0.457662416 | None | None | N |
I/M | 0.181 | likely_benign | 0.2186 | benign | -0.606 | Destabilizing | 0.901 | D | 0.603 | neutral | N | 0.4946376 | None | None | N |
I/N | 0.7383 | likely_pathogenic | 0.8163 | pathogenic | -0.98 | Destabilizing | 0.983 | D | 0.707 | prob.neutral | N | 0.464337211 | None | None | N |
I/P | 0.9445 | likely_pathogenic | 0.9533 | pathogenic | -0.965 | Destabilizing | 0.987 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/Q | 0.8886 | likely_pathogenic | 0.9259 | pathogenic | -1.004 | Destabilizing | 0.987 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/R | 0.9043 | likely_pathogenic | 0.9351 | pathogenic | -0.667 | Destabilizing | 0.961 | D | 0.708 | prob.delet. | None | None | None | None | N |
I/S | 0.7532 | likely_pathogenic | 0.8237 | pathogenic | -1.737 | Destabilizing | 0.901 | D | 0.596 | neutral | N | 0.488289181 | None | None | N |
I/T | 0.6128 | likely_pathogenic | 0.6784 | pathogenic | -1.503 | Destabilizing | 0.722 | D | 0.502 | neutral | N | 0.505930792 | None | None | N |
I/V | 0.0804 | likely_benign | 0.0797 | benign | -0.965 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.392880219 | None | None | N |
I/W | 0.9677 | likely_pathogenic | 0.9801 | pathogenic | -1.172 | Destabilizing | 0.996 | D | 0.726 | prob.delet. | None | None | None | None | N |
I/Y | 0.8946 | likely_pathogenic | 0.9339 | pathogenic | -0.889 | Destabilizing | 0.961 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.