Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26446 | 79561;79562;79563 | chr2:178566796;178566795;178566794 | chr2:179431523;179431522;179431521 |
N2AB | 24805 | 74638;74639;74640 | chr2:178566796;178566795;178566794 | chr2:179431523;179431522;179431521 |
N2A | 23878 | 71857;71858;71859 | chr2:178566796;178566795;178566794 | chr2:179431523;179431522;179431521 |
N2B | 17381 | 52366;52367;52368 | chr2:178566796;178566795;178566794 | chr2:179431523;179431522;179431521 |
Novex-1 | 17506 | 52741;52742;52743 | chr2:178566796;178566795;178566794 | chr2:179431523;179431522;179431521 |
Novex-2 | 17573 | 52942;52943;52944 | chr2:178566796;178566795;178566794 | chr2:179431523;179431522;179431521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.811 | N | 0.52 | 0.091 | 0.165133752707 | gnomAD-4.0.0 | 6.84399E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15942E-05 | 0 |
L/V | None | None | 0.896 | N | 0.521 | 0.087 | 0.165133752707 | gnomAD-4.0.0 | 6.84399E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5227E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6096 | likely_pathogenic | 0.64 | pathogenic | -1.889 | Destabilizing | 0.959 | D | 0.535 | neutral | None | None | None | None | N |
L/C | 0.4417 | ambiguous | 0.4783 | ambiguous | -1.266 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
L/D | 0.9708 | likely_pathogenic | 0.9795 | pathogenic | -1.682 | Destabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.8331 | likely_pathogenic | 0.8724 | pathogenic | -1.532 | Destabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | N |
L/F | 0.0957 | likely_benign | 0.101 | benign | -1.045 | Destabilizing | 0.015 | N | 0.267 | neutral | None | None | None | None | N |
L/G | 0.8336 | likely_pathogenic | 0.8602 | pathogenic | -2.351 | Highly Destabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/H | 0.4355 | ambiguous | 0.4729 | ambiguous | -1.588 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
L/I | 0.148 | likely_benign | 0.1487 | benign | -0.617 | Destabilizing | 0.811 | D | 0.52 | neutral | N | 0.491372345 | None | None | N |
L/K | 0.7861 | likely_pathogenic | 0.8212 | pathogenic | -1.526 | Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/M | 0.1142 | likely_benign | 0.1111 | benign | -0.541 | Destabilizing | 0.988 | D | 0.566 | neutral | None | None | None | None | N |
L/N | 0.7973 | likely_pathogenic | 0.8099 | pathogenic | -1.717 | Destabilizing | 0.996 | D | 0.8 | deleterious | None | None | None | None | N |
L/P | 0.9854 | likely_pathogenic | 0.9915 | pathogenic | -1.014 | Destabilizing | 0.995 | D | 0.803 | deleterious | N | 0.500908705 | None | None | N |
L/Q | 0.3757 | ambiguous | 0.4287 | ambiguous | -1.661 | Destabilizing | 0.995 | D | 0.745 | deleterious | N | 0.474157169 | None | None | N |
L/R | 0.68 | likely_pathogenic | 0.7402 | pathogenic | -1.139 | Destabilizing | 0.995 | D | 0.727 | prob.delet. | N | 0.48904542 | None | None | N |
L/S | 0.6988 | likely_pathogenic | 0.7113 | pathogenic | -2.389 | Highly Destabilizing | 0.988 | D | 0.623 | neutral | None | None | None | None | N |
L/T | 0.6214 | likely_pathogenic | 0.6396 | pathogenic | -2.097 | Highly Destabilizing | 0.988 | D | 0.605 | neutral | None | None | None | None | N |
L/V | 0.143 | likely_benign | 0.1481 | benign | -1.014 | Destabilizing | 0.896 | D | 0.521 | neutral | N | 0.460622577 | None | None | N |
L/W | 0.315 | likely_benign | 0.3687 | ambiguous | -1.312 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/Y | 0.2665 | likely_benign | 0.2846 | benign | -1.008 | Destabilizing | 0.851 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.