Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26452 | 79579;79580;79581 | chr2:178566778;178566777;178566776 | chr2:179431505;179431504;179431503 |
N2AB | 24811 | 74656;74657;74658 | chr2:178566778;178566777;178566776 | chr2:179431505;179431504;179431503 |
N2A | 23884 | 71875;71876;71877 | chr2:178566778;178566777;178566776 | chr2:179431505;179431504;179431503 |
N2B | 17387 | 52384;52385;52386 | chr2:178566778;178566777;178566776 | chr2:179431505;179431504;179431503 |
Novex-1 | 17512 | 52759;52760;52761 | chr2:178566778;178566777;178566776 | chr2:179431505;179431504;179431503 |
Novex-2 | 17579 | 52960;52961;52962 | chr2:178566778;178566777;178566776 | chr2:179431505;179431504;179431503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs375061238 | None | 0.999 | N | 0.592 | 0.503 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/K | rs375061238 | None | 0.999 | N | 0.592 | 0.503 | None | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0998 | likely_benign | 0.0763 | benign | -0.912 | Destabilizing | 0.996 | D | 0.353 | neutral | N | 0.495162012 | None | None | N |
T/C | 0.4433 | ambiguous | 0.3692 | ambiguous | -0.423 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
T/D | 0.7618 | likely_pathogenic | 0.7108 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
T/E | 0.6046 | likely_pathogenic | 0.5721 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
T/F | 0.3853 | ambiguous | 0.3294 | benign | -0.885 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/G | 0.3281 | likely_benign | 0.2453 | benign | -1.198 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
T/H | 0.4208 | ambiguous | 0.3815 | ambiguous | -1.387 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
T/I | 0.1695 | likely_benign | 0.1539 | benign | -0.23 | Destabilizing | 0.998 | D | 0.587 | neutral | N | 0.454643541 | None | None | N |
T/K | 0.4455 | ambiguous | 0.4517 | ambiguous | -0.841 | Destabilizing | 0.999 | D | 0.592 | neutral | N | 0.454198037 | None | None | N |
T/L | 0.0831 | likely_benign | 0.082 | benign | -0.23 | Destabilizing | 0.994 | D | 0.399 | neutral | None | None | None | None | N |
T/M | 0.0795 | likely_benign | 0.0737 | benign | 0.04 | Stabilizing | 0.985 | D | 0.343 | neutral | None | None | None | None | N |
T/N | 0.1959 | likely_benign | 0.1554 | benign | -0.794 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
T/P | 0.3525 | ambiguous | 0.2437 | benign | -0.425 | Destabilizing | 1.0 | D | 0.657 | neutral | D | 0.522868688 | None | None | N |
T/Q | 0.3269 | likely_benign | 0.3064 | benign | -0.881 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/R | 0.3911 | ambiguous | 0.3837 | ambiguous | -0.606 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.463798955 | None | None | N |
T/S | 0.1496 | likely_benign | 0.1204 | benign | -1.056 | Destabilizing | 0.998 | D | 0.355 | neutral | N | 0.464455103 | None | None | N |
T/V | 0.1261 | likely_benign | 0.1144 | benign | -0.425 | Destabilizing | 0.994 | D | 0.365 | neutral | None | None | None | None | N |
T/W | 0.7167 | likely_pathogenic | 0.6549 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
T/Y | 0.4514 | ambiguous | 0.3981 | ambiguous | -0.646 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.