Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26454 | 79585;79586;79587 | chr2:178566772;178566771;178566770 | chr2:179431499;179431498;179431497 |
N2AB | 24813 | 74662;74663;74664 | chr2:178566772;178566771;178566770 | chr2:179431499;179431498;179431497 |
N2A | 23886 | 71881;71882;71883 | chr2:178566772;178566771;178566770 | chr2:179431499;179431498;179431497 |
N2B | 17389 | 52390;52391;52392 | chr2:178566772;178566771;178566770 | chr2:179431499;179431498;179431497 |
Novex-1 | 17514 | 52765;52766;52767 | chr2:178566772;178566771;178566770 | chr2:179431499;179431498;179431497 |
Novex-2 | 17581 | 52966;52967;52968 | chr2:178566772;178566771;178566770 | chr2:179431499;179431498;179431497 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 1.0 | N | 0.884 | 0.507 | 0.594593949059 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.176 | likely_benign | 0.1985 | benign | -0.378 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.494988654 | None | None | N |
D/C | 0.5734 | likely_pathogenic | 0.606 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
D/E | 0.15 | likely_benign | 0.148 | benign | -0.412 | Destabilizing | 1.0 | D | 0.524 | neutral | N | 0.517884156 | None | None | N |
D/F | 0.5289 | ambiguous | 0.5436 | ambiguous | -0.448 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
D/G | 0.0972 | likely_benign | 0.0999 | benign | -0.604 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.357953995 | None | None | N |
D/H | 0.2979 | likely_benign | 0.3422 | ambiguous | -0.609 | Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.50316542 | None | None | N |
D/I | 0.4752 | ambiguous | 0.5199 | ambiguous | 0.18 | Stabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
D/K | 0.4261 | ambiguous | 0.4827 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
D/L | 0.3764 | ambiguous | 0.4218 | ambiguous | 0.18 | Stabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
D/M | 0.5612 | ambiguous | 0.5863 | pathogenic | 0.447 | Stabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
D/N | 0.0892 | likely_benign | 0.0893 | benign | -0.382 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.421202971 | None | None | N |
D/P | 0.8557 | likely_pathogenic | 0.8899 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
D/Q | 0.3389 | likely_benign | 0.3734 | ambiguous | -0.337 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
D/R | 0.4712 | ambiguous | 0.5266 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
D/S | 0.1313 | likely_benign | 0.1373 | benign | -0.603 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
D/T | 0.2655 | likely_benign | 0.2888 | benign | -0.453 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
D/V | 0.3046 | likely_benign | 0.3389 | benign | 0.016 | Stabilizing | 1.0 | D | 0.902 | deleterious | N | 0.483752275 | None | None | N |
D/W | 0.8445 | likely_pathogenic | 0.8623 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
D/Y | 0.2141 | likely_benign | 0.2363 | benign | -0.29 | Destabilizing | 1.0 | D | 0.884 | deleterious | N | 0.508629954 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.