Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26455 | 79588;79589;79590 | chr2:178566769;178566768;178566767 | chr2:179431496;179431495;179431494 |
N2AB | 24814 | 74665;74666;74667 | chr2:178566769;178566768;178566767 | chr2:179431496;179431495;179431494 |
N2A | 23887 | 71884;71885;71886 | chr2:178566769;178566768;178566767 | chr2:179431496;179431495;179431494 |
N2B | 17390 | 52393;52394;52395 | chr2:178566769;178566768;178566767 | chr2:179431496;179431495;179431494 |
Novex-1 | 17515 | 52768;52769;52770 | chr2:178566769;178566768;178566767 | chr2:179431496;179431495;179431494 |
Novex-2 | 17582 | 52969;52970;52971 | chr2:178566769;178566768;178566767 | chr2:179431496;179431495;179431494 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs1706027095 | None | 1.0 | N | 0.751 | 0.473 | 0.583959843308 | gnomAD-4.0.0 | 2.05314E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69865E-06 | 0 | 0 |
H/Y | None | None | 0.999 | N | 0.606 | 0.522 | 0.330331372229 | gnomAD-4.0.0 | 6.84394E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9953E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8366 | likely_pathogenic | 0.8025 | pathogenic | -0.459 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
H/C | 0.3613 | ambiguous | 0.326 | benign | 0.504 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
H/D | 0.8416 | likely_pathogenic | 0.8105 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.480799306 | None | None | N |
H/E | 0.8643 | likely_pathogenic | 0.8336 | pathogenic | -0.262 | Destabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
H/F | 0.7911 | likely_pathogenic | 0.7554 | pathogenic | 0.582 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
H/G | 0.7925 | likely_pathogenic | 0.762 | pathogenic | -0.816 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
H/I | 0.8901 | likely_pathogenic | 0.8679 | pathogenic | 0.517 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
H/K | 0.5919 | likely_pathogenic | 0.591 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
H/L | 0.5956 | likely_pathogenic | 0.55 | ambiguous | 0.517 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.514593135 | None | None | N |
H/M | 0.8789 | likely_pathogenic | 0.8607 | pathogenic | 0.452 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
H/N | 0.4086 | ambiguous | 0.3644 | ambiguous | -0.162 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.448157499 | None | None | N |
H/P | 0.9677 | likely_pathogenic | 0.9565 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.507804331 | None | None | N |
H/Q | 0.5674 | likely_pathogenic | 0.5426 | ambiguous | 0.068 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.498276888 | None | None | N |
H/R | 0.2352 | likely_benign | 0.2164 | benign | -0.763 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.463758883 | None | None | N |
H/S | 0.7055 | likely_pathogenic | 0.6677 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
H/T | 0.8077 | likely_pathogenic | 0.782 | pathogenic | 0.046 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
H/V | 0.8257 | likely_pathogenic | 0.796 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
H/W | 0.833 | likely_pathogenic | 0.7962 | pathogenic | 0.726 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
H/Y | 0.4193 | ambiguous | 0.374 | ambiguous | 0.909 | Stabilizing | 0.999 | D | 0.606 | neutral | N | 0.47859726 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.