Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26459 | 79600;79601;79602 | chr2:178566757;178566756;178566755 | chr2:179431484;179431483;179431482 |
N2AB | 24818 | 74677;74678;74679 | chr2:178566757;178566756;178566755 | chr2:179431484;179431483;179431482 |
N2A | 23891 | 71896;71897;71898 | chr2:178566757;178566756;178566755 | chr2:179431484;179431483;179431482 |
N2B | 17394 | 52405;52406;52407 | chr2:178566757;178566756;178566755 | chr2:179431484;179431483;179431482 |
Novex-1 | 17519 | 52780;52781;52782 | chr2:178566757;178566756;178566755 | chr2:179431484;179431483;179431482 |
Novex-2 | 17586 | 52981;52982;52983 | chr2:178566757;178566756;178566755 | chr2:179431484;179431483;179431482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | 0.999 | D | 0.845 | 0.515 | 0.633181949713 | gnomAD-4.0.0 | 2.73749E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59813E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -3.019 | Highly Destabilizing | 0.953 | D | 0.799 | deleterious | None | None | None | None | N |
F/C | 0.9815 | likely_pathogenic | 0.9798 | pathogenic | -1.639 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.564583674 | None | None | N |
F/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.912 | Highly Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
F/E | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.679 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
F/G | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -3.459 | Highly Destabilizing | 0.993 | D | 0.863 | deleterious | None | None | None | None | N |
F/H | 0.9937 | likely_pathogenic | 0.9945 | pathogenic | -2.39 | Highly Destabilizing | 0.986 | D | 0.807 | deleterious | None | None | None | None | N |
F/I | 0.9635 | likely_pathogenic | 0.9551 | pathogenic | -1.545 | Destabilizing | 0.982 | D | 0.747 | deleterious | N | 0.50666915 | None | None | N |
F/K | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -2.513 | Highly Destabilizing | 0.993 | D | 0.883 | deleterious | None | None | None | None | N |
F/L | 0.995 | likely_pathogenic | 0.9942 | pathogenic | -1.545 | Destabilizing | 0.885 | D | 0.701 | prob.neutral | N | 0.511063696 | None | None | N |
F/M | 0.9812 | likely_pathogenic | 0.9774 | pathogenic | -1.112 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
F/N | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -3.218 | Highly Destabilizing | 0.998 | D | 0.89 | deleterious | None | None | None | None | N |
F/P | 1.0 | likely_pathogenic | 1.0 | pathogenic | -2.054 | Highly Destabilizing | 0.998 | D | 0.902 | deleterious | None | None | None | None | N |
F/Q | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.058 | Highly Destabilizing | 0.998 | D | 0.903 | deleterious | None | None | None | None | N |
F/R | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -2.227 | Highly Destabilizing | 0.993 | D | 0.889 | deleterious | None | None | None | None | N |
F/S | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -3.616 | Highly Destabilizing | 0.991 | D | 0.848 | deleterious | D | 0.553227369 | None | None | N |
F/T | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -3.266 | Highly Destabilizing | 0.993 | D | 0.855 | deleterious | None | None | None | None | N |
F/V | 0.9701 | likely_pathogenic | 0.9642 | pathogenic | -2.054 | Highly Destabilizing | 0.939 | D | 0.756 | deleterious | N | 0.490522997 | None | None | N |
F/W | 0.891 | likely_pathogenic | 0.9007 | pathogenic | -0.81 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
F/Y | 0.2455 | likely_benign | 0.2631 | benign | -1.255 | Destabilizing | 0.046 | N | 0.245 | neutral | N | 0.480365822 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.