Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26471 | 79636;79637;79638 | chr2:178566721;178566720;178566719 | chr2:179431448;179431447;179431446 |
N2AB | 24830 | 74713;74714;74715 | chr2:178566721;178566720;178566719 | chr2:179431448;179431447;179431446 |
N2A | 23903 | 71932;71933;71934 | chr2:178566721;178566720;178566719 | chr2:179431448;179431447;179431446 |
N2B | 17406 | 52441;52442;52443 | chr2:178566721;178566720;178566719 | chr2:179431448;179431447;179431446 |
Novex-1 | 17531 | 52816;52817;52818 | chr2:178566721;178566720;178566719 | chr2:179431448;179431447;179431446 |
Novex-2 | 17598 | 53017;53018;53019 | chr2:178566721;178566720;178566719 | chr2:179431448;179431447;179431446 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.92 | N | 0.509 | 0.341 | 0.363158594168 | gnomAD-4.0.0 | 1.59201E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02572E-05 |
E/K | None | None | 0.704 | D | 0.441 | 0.204 | 0.264547087235 | gnomAD-4.0.0 | 3.60099E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1209 | likely_benign | 0.118 | benign | -0.49 | Destabilizing | 0.704 | D | 0.472 | neutral | N | 0.504954931 | None | None | I |
E/C | 0.7275 | likely_pathogenic | 0.7165 | pathogenic | -0.096 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | I |
E/D | 0.0962 | likely_benign | 0.097 | benign | -0.426 | Destabilizing | 0.826 | D | 0.425 | neutral | N | 0.487601321 | None | None | I |
E/F | 0.5926 | likely_pathogenic | 0.5942 | pathogenic | -0.366 | Destabilizing | 0.982 | D | 0.488 | neutral | None | None | None | None | I |
E/G | 0.1561 | likely_benign | 0.1704 | benign | -0.69 | Destabilizing | 0.92 | D | 0.509 | neutral | N | 0.500651534 | None | None | I |
E/H | 0.4015 | ambiguous | 0.4163 | ambiguous | -0.18 | Destabilizing | 0.991 | D | 0.503 | neutral | None | None | None | None | I |
E/I | 0.2007 | likely_benign | 0.1968 | benign | 0.008 | Stabilizing | 0.964 | D | 0.506 | neutral | None | None | None | None | I |
E/K | 0.1181 | likely_benign | 0.1354 | benign | 0.228 | Stabilizing | 0.704 | D | 0.441 | neutral | D | 0.524791486 | None | None | I |
E/L | 0.2097 | likely_benign | 0.2136 | benign | 0.008 | Stabilizing | 0.046 | N | 0.319 | neutral | None | None | None | None | I |
E/M | 0.2863 | likely_benign | 0.2819 | benign | 0.144 | Stabilizing | 0.982 | D | 0.503 | neutral | None | None | None | None | I |
E/N | 0.1946 | likely_benign | 0.1906 | benign | -0.098 | Destabilizing | 0.939 | D | 0.509 | neutral | None | None | None | None | I |
E/P | 0.2743 | likely_benign | 0.2678 | benign | -0.138 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | I |
E/Q | 0.1124 | likely_benign | 0.12 | benign | -0.067 | Destabilizing | 0.31 | N | 0.127 | neutral | N | 0.493815218 | None | None | I |
E/R | 0.2272 | likely_benign | 0.2539 | benign | 0.426 | Stabilizing | 0.939 | D | 0.518 | neutral | None | None | None | None | I |
E/S | 0.1594 | likely_benign | 0.1599 | benign | -0.255 | Destabilizing | 0.373 | N | 0.185 | neutral | None | None | None | None | I |
E/T | 0.1744 | likely_benign | 0.1683 | benign | -0.092 | Destabilizing | 0.884 | D | 0.498 | neutral | None | None | None | None | I |
E/V | 0.1288 | likely_benign | 0.1287 | benign | -0.138 | Destabilizing | 0.852 | D | 0.521 | neutral | N | 0.484575195 | None | None | I |
E/W | 0.8663 | likely_pathogenic | 0.8704 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
E/Y | 0.49 | ambiguous | 0.4878 | ambiguous | -0.124 | Destabilizing | 0.997 | D | 0.501 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.