Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26473 | 79642;79643;79644 | chr2:178566715;178566714;178566713 | chr2:179431442;179431441;179431440 |
N2AB | 24832 | 74719;74720;74721 | chr2:178566715;178566714;178566713 | chr2:179431442;179431441;179431440 |
N2A | 23905 | 71938;71939;71940 | chr2:178566715;178566714;178566713 | chr2:179431442;179431441;179431440 |
N2B | 17408 | 52447;52448;52449 | chr2:178566715;178566714;178566713 | chr2:179431442;179431441;179431440 |
Novex-1 | 17533 | 52822;52823;52824 | chr2:178566715;178566714;178566713 | chr2:179431442;179431441;179431440 |
Novex-2 | 17600 | 53023;53024;53025 | chr2:178566715;178566714;178566713 | chr2:179431442;179431441;179431440 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.999 | D | 0.882 | 0.686 | 0.469907520169 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/N | None | None | 0.999 | D | 0.889 | 0.538 | 0.503744809241 | gnomAD-4.0.0 | 6.84346E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2216 | likely_benign | 0.2564 | benign | -0.728 | Destabilizing | 0.998 | D | 0.848 | deleterious | None | None | None | None | N |
S/C | 0.2542 | likely_benign | 0.2897 | benign | -0.69 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.576603495 | None | None | N |
S/D | 0.9797 | likely_pathogenic | 0.9747 | pathogenic | -0.999 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
S/E | 0.9872 | likely_pathogenic | 0.9844 | pathogenic | -0.929 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
S/F | 0.8885 | likely_pathogenic | 0.905 | pathogenic | -0.606 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
S/G | 0.2523 | likely_benign | 0.2915 | benign | -1.038 | Destabilizing | 0.999 | D | 0.882 | deleterious | D | 0.535582365 | None | None | N |
S/H | 0.9585 | likely_pathogenic | 0.9593 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
S/I | 0.7331 | likely_pathogenic | 0.7633 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.894 | deleterious | D | 0.576096516 | None | None | N |
S/K | 0.997 | likely_pathogenic | 0.9971 | pathogenic | -0.817 | Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
S/L | 0.3917 | ambiguous | 0.4748 | ambiguous | 0.012 | Stabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
S/M | 0.6484 | likely_pathogenic | 0.6801 | pathogenic | 0.053 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
S/N | 0.851 | likely_pathogenic | 0.8423 | pathogenic | -1.012 | Destabilizing | 0.999 | D | 0.889 | deleterious | D | 0.575843026 | None | None | N |
S/P | 0.9728 | likely_pathogenic | 0.973 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
S/Q | 0.9744 | likely_pathogenic | 0.9721 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
S/R | 0.9941 | likely_pathogenic | 0.9945 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.552205363 | None | None | N |
S/T | 0.1884 | likely_benign | 0.2022 | benign | -0.86 | Destabilizing | 0.999 | D | 0.888 | deleterious | D | 0.525743316 | None | None | N |
S/V | 0.6093 | likely_pathogenic | 0.6373 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
S/W | 0.9644 | likely_pathogenic | 0.9692 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
S/Y | 0.9254 | likely_pathogenic | 0.9276 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.