Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26477 | 79654;79655;79656 | chr2:178566703;178566702;178566701 | chr2:179431430;179431429;179431428 |
N2AB | 24836 | 74731;74732;74733 | chr2:178566703;178566702;178566701 | chr2:179431430;179431429;179431428 |
N2A | 23909 | 71950;71951;71952 | chr2:178566703;178566702;178566701 | chr2:179431430;179431429;179431428 |
N2B | 17412 | 52459;52460;52461 | chr2:178566703;178566702;178566701 | chr2:179431430;179431429;179431428 |
Novex-1 | 17537 | 52834;52835;52836 | chr2:178566703;178566702;178566701 | chr2:179431430;179431429;179431428 |
Novex-2 | 17604 | 53035;53036;53037 | chr2:178566703;178566702;178566701 | chr2:179431430;179431429;179431428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1706005880 | None | None | N | 0.103 | 0.081 | 0.282179105231 | gnomAD-4.0.0 | 4.10615E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39726E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0791 | likely_benign | 0.0772 | benign | -0.828 | Destabilizing | None | N | 0.075 | neutral | N | 0.457851631 | None | None | N |
V/C | 0.4325 | ambiguous | 0.3953 | ambiguous | -0.71 | Destabilizing | 0.204 | N | 0.427 | neutral | None | None | None | None | N |
V/D | 0.1903 | likely_benign | 0.1817 | benign | -0.25 | Destabilizing | 0.026 | N | 0.529 | neutral | N | 0.473802518 | None | None | N |
V/E | 0.1774 | likely_benign | 0.1752 | benign | -0.264 | Destabilizing | 0.035 | N | 0.431 | neutral | None | None | None | None | N |
V/F | 0.1389 | likely_benign | 0.1329 | benign | -0.651 | Destabilizing | 0.046 | N | 0.568 | neutral | N | 0.477681753 | None | None | N |
V/G | 0.1177 | likely_benign | 0.1148 | benign | -1.053 | Destabilizing | 0.006 | N | 0.269 | neutral | N | 0.481613925 | None | None | N |
V/H | 0.3156 | likely_benign | 0.3034 | benign | -0.25 | Destabilizing | 0.439 | N | 0.431 | neutral | None | None | None | None | N |
V/I | 0.0705 | likely_benign | 0.0668 | benign | -0.332 | Destabilizing | None | N | 0.103 | neutral | N | 0.510107248 | None | None | N |
V/K | 0.2066 | likely_benign | 0.2151 | benign | -0.508 | Destabilizing | 0.035 | N | 0.429 | neutral | None | None | None | None | N |
V/L | 0.091 | likely_benign | 0.0936 | benign | -0.332 | Destabilizing | None | N | 0.14 | neutral | N | 0.494599078 | None | None | N |
V/M | 0.0935 | likely_benign | 0.0889 | benign | -0.543 | Destabilizing | 0.06 | N | 0.404 | neutral | None | None | None | None | N |
V/N | 0.1298 | likely_benign | 0.1137 | benign | -0.462 | Destabilizing | 0.035 | N | 0.585 | neutral | None | None | None | None | N |
V/P | 0.1234 | likely_benign | 0.1113 | benign | -0.464 | Destabilizing | None | N | 0.178 | neutral | None | None | None | None | N |
V/Q | 0.1742 | likely_benign | 0.1757 | benign | -0.569 | Destabilizing | 0.204 | N | 0.6 | neutral | None | None | None | None | N |
V/R | 0.1945 | likely_benign | 0.2046 | benign | -0.052 | Destabilizing | 0.035 | N | 0.601 | neutral | None | None | None | None | N |
V/S | 0.0996 | likely_benign | 0.0949 | benign | -0.95 | Destabilizing | 0.001 | N | 0.179 | neutral | None | None | None | None | N |
V/T | 0.0954 | likely_benign | 0.0907 | benign | -0.845 | Destabilizing | 0.007 | N | 0.184 | neutral | None | None | None | None | N |
V/W | 0.6129 | likely_pathogenic | 0.5955 | pathogenic | -0.752 | Destabilizing | 0.747 | D | 0.459 | neutral | None | None | None | None | N |
V/Y | 0.352 | ambiguous | 0.3245 | benign | -0.455 | Destabilizing | 0.204 | N | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.