Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26480 | 79663;79664;79665 | chr2:178566694;178566693;178566692 | chr2:179431421;179431420;179431419 |
N2AB | 24839 | 74740;74741;74742 | chr2:178566694;178566693;178566692 | chr2:179431421;179431420;179431419 |
N2A | 23912 | 71959;71960;71961 | chr2:178566694;178566693;178566692 | chr2:179431421;179431420;179431419 |
N2B | 17415 | 52468;52469;52470 | chr2:178566694;178566693;178566692 | chr2:179431421;179431420;179431419 |
Novex-1 | 17540 | 52843;52844;52845 | chr2:178566694;178566693;178566692 | chr2:179431421;179431420;179431419 |
Novex-2 | 17607 | 53044;53045;53046 | chr2:178566694;178566693;178566692 | chr2:179431421;179431420;179431419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.997 | N | 0.635 | 0.249 | 0.144782658237 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6782 | likely_pathogenic | 0.6205 | pathogenic | -0.336 | Destabilizing | 0.987 | D | 0.542 | neutral | None | None | None | None | N |
K/C | 0.8145 | likely_pathogenic | 0.7594 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/D | 0.9418 | likely_pathogenic | 0.9235 | pathogenic | -0.151 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
K/E | 0.5257 | ambiguous | 0.4609 | ambiguous | -0.097 | Destabilizing | 0.991 | D | 0.538 | neutral | N | 0.520438885 | None | None | N |
K/F | 0.9067 | likely_pathogenic | 0.8882 | pathogenic | -0.247 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
K/G | 0.8559 | likely_pathogenic | 0.8138 | pathogenic | -0.641 | Destabilizing | 0.993 | D | 0.619 | neutral | None | None | None | None | N |
K/H | 0.4648 | ambiguous | 0.4144 | ambiguous | -0.991 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/I | 0.5595 | ambiguous | 0.5425 | ambiguous | 0.423 | Stabilizing | 0.999 | D | 0.779 | deleterious | N | 0.489769261 | None | None | N |
K/L | 0.5355 | ambiguous | 0.5144 | ambiguous | 0.423 | Stabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
K/M | 0.4285 | ambiguous | 0.4042 | ambiguous | 0.371 | Stabilizing | 1.0 | D | 0.684 | prob.delet. | None | None | None | None | N |
K/N | 0.8371 | likely_pathogenic | 0.8055 | pathogenic | -0.2 | Destabilizing | 0.997 | D | 0.635 | neutral | N | 0.492961624 | None | None | N |
K/P | 0.8729 | likely_pathogenic | 0.8432 | pathogenic | 0.201 | Stabilizing | 0.999 | D | 0.69 | prob.delet. | None | None | None | None | N |
K/Q | 0.2414 | likely_benign | 0.2096 | benign | -0.376 | Destabilizing | 0.999 | D | 0.627 | neutral | N | 0.518014655 | None | None | N |
K/R | 0.0837 | likely_benign | 0.0789 | benign | -0.408 | Destabilizing | 0.996 | D | 0.634 | neutral | N | 0.470434139 | None | None | N |
K/S | 0.8042 | likely_pathogenic | 0.7602 | pathogenic | -0.787 | Destabilizing | 0.854 | D | 0.416 | neutral | None | None | None | None | N |
K/T | 0.394 | ambiguous | 0.3706 | ambiguous | -0.553 | Destabilizing | 0.983 | D | 0.66 | prob.neutral | N | 0.454184102 | None | None | N |
K/V | 0.4938 | ambiguous | 0.4747 | ambiguous | 0.201 | Stabilizing | 0.999 | D | 0.652 | prob.neutral | None | None | None | None | N |
K/W | 0.8751 | likely_pathogenic | 0.8449 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
K/Y | 0.8302 | likely_pathogenic | 0.7955 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.