Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26490 | 79693;79694;79695 | chr2:178566664;178566663;178566662 | chr2:179431391;179431390;179431389 |
N2AB | 24849 | 74770;74771;74772 | chr2:178566664;178566663;178566662 | chr2:179431391;179431390;179431389 |
N2A | 23922 | 71989;71990;71991 | chr2:178566664;178566663;178566662 | chr2:179431391;179431390;179431389 |
N2B | 17425 | 52498;52499;52500 | chr2:178566664;178566663;178566662 | chr2:179431391;179431390;179431389 |
Novex-1 | 17550 | 52873;52874;52875 | chr2:178566664;178566663;178566662 | chr2:179431391;179431390;179431389 |
Novex-2 | 17617 | 53074;53075;53076 | chr2:178566664;178566663;178566662 | chr2:179431391;179431390;179431389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs746317804 | -0.761 | 0.549 | D | 0.795 | 0.282 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 1.29282E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs746317804 | -0.761 | 0.549 | D | 0.795 | 0.282 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs746317804 | -0.761 | 0.549 | D | 0.795 | 0.282 | None | gnomAD-4.0.0 | 7.69371E-06 | None | None | None | None | I | None | 6.76979E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.68039E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1005 | likely_benign | 0.1042 | benign | -1.352 | Destabilizing | 0.201 | N | 0.577 | neutral | N | 0.499524895 | None | None | I |
P/C | 0.5336 | ambiguous | 0.5094 | ambiguous | -1.011 | Destabilizing | 0.005 | N | 0.543 | neutral | None | None | None | None | I |
P/D | 0.8844 | likely_pathogenic | 0.8962 | pathogenic | -1.621 | Destabilizing | 0.617 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/E | 0.6009 | likely_pathogenic | 0.6526 | pathogenic | -1.676 | Destabilizing | 0.447 | N | 0.705 | prob.neutral | None | None | None | None | I |
P/F | 0.6524 | likely_pathogenic | 0.6375 | pathogenic | -1.345 | Destabilizing | 0.972 | D | 0.845 | deleterious | None | None | None | None | I |
P/G | 0.5409 | ambiguous | 0.5315 | ambiguous | -1.595 | Destabilizing | 0.617 | D | 0.767 | deleterious | None | None | None | None | I |
P/H | 0.4559 | ambiguous | 0.4682 | ambiguous | -1.111 | Destabilizing | 0.92 | D | 0.842 | deleterious | None | None | None | None | I |
P/I | 0.4356 | ambiguous | 0.4494 | ambiguous | -0.798 | Destabilizing | 0.92 | D | 0.821 | deleterious | None | None | None | None | I |
P/K | 0.5645 | likely_pathogenic | 0.6237 | pathogenic | -0.999 | Destabilizing | 0.447 | N | 0.744 | deleterious | None | None | None | None | I |
P/L | 0.2234 | likely_benign | 0.2204 | benign | -0.798 | Destabilizing | 0.549 | D | 0.795 | deleterious | D | 0.522660264 | None | None | I |
P/M | 0.3967 | ambiguous | 0.4 | ambiguous | -0.562 | Destabilizing | 0.92 | D | 0.842 | deleterious | None | None | None | None | I |
P/N | 0.6661 | likely_pathogenic | 0.6746 | pathogenic | -0.795 | Destabilizing | 0.617 | D | 0.811 | deleterious | None | None | None | None | I |
P/Q | 0.3028 | likely_benign | 0.3419 | ambiguous | -1.104 | Destabilizing | 0.016 | N | 0.437 | neutral | N | 0.491425277 | None | None | I |
P/R | 0.4302 | ambiguous | 0.4864 | ambiguous | -0.423 | Destabilizing | 0.681 | D | 0.812 | deleterious | N | 0.505263571 | None | None | I |
P/S | 0.2464 | likely_benign | 0.2452 | benign | -1.216 | Destabilizing | 0.045 | N | 0.45 | neutral | N | 0.481790492 | None | None | I |
P/T | 0.2637 | likely_benign | 0.2623 | benign | -1.178 | Destabilizing | 0.379 | N | 0.74 | deleterious | N | 0.517380345 | None | None | I |
P/V | 0.32 | likely_benign | 0.3312 | benign | -0.949 | Destabilizing | 0.617 | D | 0.779 | deleterious | None | None | None | None | I |
P/W | 0.8792 | likely_pathogenic | 0.865 | pathogenic | -1.451 | Destabilizing | 0.992 | D | 0.832 | deleterious | None | None | None | None | I |
P/Y | 0.7043 | likely_pathogenic | 0.6965 | pathogenic | -1.15 | Destabilizing | 0.92 | D | 0.844 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.