Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2649079693;79694;79695 chr2:178566664;178566663;178566662chr2:179431391;179431390;179431389
N2AB2484974770;74771;74772 chr2:178566664;178566663;178566662chr2:179431391;179431390;179431389
N2A2392271989;71990;71991 chr2:178566664;178566663;178566662chr2:179431391;179431390;179431389
N2B1742552498;52499;52500 chr2:178566664;178566663;178566662chr2:179431391;179431390;179431389
Novex-11755052873;52874;52875 chr2:178566664;178566663;178566662chr2:179431391;179431390;179431389
Novex-21761753074;53075;53076 chr2:178566664;178566663;178566662chr2:179431391;179431390;179431389
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCA
  • RefSeq wild type template codon: GGT
  • Domain: Fn3-81
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.2467
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/L rs746317804 -0.761 0.549 D 0.795 0.282 None gnomAD-2.1.1 8.06E-06 None None None None I None 1.29282E-04 0 None 0 0 None 0 None 0 0 0
P/L rs746317804 -0.761 0.549 D 0.795 0.282 None gnomAD-3.1.2 1.97E-05 None None None None I None 7.24E-05 0 0 0 0 None 0 0 0 0 0
P/L rs746317804 -0.761 0.549 D 0.795 0.282 None gnomAD-4.0.0 7.69371E-06 None None None None I None 6.76979E-05 0 None 0 0 None 0 0 0 2.68039E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.1005 likely_benign 0.1042 benign -1.352 Destabilizing 0.201 N 0.577 neutral N 0.499524895 None None I
P/C 0.5336 ambiguous 0.5094 ambiguous -1.011 Destabilizing 0.005 N 0.543 neutral None None None None I
P/D 0.8844 likely_pathogenic 0.8962 pathogenic -1.621 Destabilizing 0.617 D 0.727 prob.delet. None None None None I
P/E 0.6009 likely_pathogenic 0.6526 pathogenic -1.676 Destabilizing 0.447 N 0.705 prob.neutral None None None None I
P/F 0.6524 likely_pathogenic 0.6375 pathogenic -1.345 Destabilizing 0.972 D 0.845 deleterious None None None None I
P/G 0.5409 ambiguous 0.5315 ambiguous -1.595 Destabilizing 0.617 D 0.767 deleterious None None None None I
P/H 0.4559 ambiguous 0.4682 ambiguous -1.111 Destabilizing 0.92 D 0.842 deleterious None None None None I
P/I 0.4356 ambiguous 0.4494 ambiguous -0.798 Destabilizing 0.92 D 0.821 deleterious None None None None I
P/K 0.5645 likely_pathogenic 0.6237 pathogenic -0.999 Destabilizing 0.447 N 0.744 deleterious None None None None I
P/L 0.2234 likely_benign 0.2204 benign -0.798 Destabilizing 0.549 D 0.795 deleterious D 0.522660264 None None I
P/M 0.3967 ambiguous 0.4 ambiguous -0.562 Destabilizing 0.92 D 0.842 deleterious None None None None I
P/N 0.6661 likely_pathogenic 0.6746 pathogenic -0.795 Destabilizing 0.617 D 0.811 deleterious None None None None I
P/Q 0.3028 likely_benign 0.3419 ambiguous -1.104 Destabilizing 0.016 N 0.437 neutral N 0.491425277 None None I
P/R 0.4302 ambiguous 0.4864 ambiguous -0.423 Destabilizing 0.681 D 0.812 deleterious N 0.505263571 None None I
P/S 0.2464 likely_benign 0.2452 benign -1.216 Destabilizing 0.045 N 0.45 neutral N 0.481790492 None None I
P/T 0.2637 likely_benign 0.2623 benign -1.178 Destabilizing 0.379 N 0.74 deleterious N 0.517380345 None None I
P/V 0.32 likely_benign 0.3312 benign -0.949 Destabilizing 0.617 D 0.779 deleterious None None None None I
P/W 0.8792 likely_pathogenic 0.865 pathogenic -1.451 Destabilizing 0.992 D 0.832 deleterious None None None None I
P/Y 0.7043 likely_pathogenic 0.6965 pathogenic -1.15 Destabilizing 0.92 D 0.844 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.