Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26493 | 79702;79703;79704 | chr2:178566655;178566654;178566653 | chr2:179431382;179431381;179431380 |
N2AB | 24852 | 74779;74780;74781 | chr2:178566655;178566654;178566653 | chr2:179431382;179431381;179431380 |
N2A | 23925 | 71998;71999;72000 | chr2:178566655;178566654;178566653 | chr2:179431382;179431381;179431380 |
N2B | 17428 | 52507;52508;52509 | chr2:178566655;178566654;178566653 | chr2:179431382;179431381;179431380 |
Novex-1 | 17553 | 52882;52883;52884 | chr2:178566655;178566654;178566653 | chr2:179431382;179431381;179431380 |
Novex-2 | 17620 | 53083;53084;53085 | chr2:178566655;178566654;178566653 | chr2:179431382;179431381;179431380 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.999 | N | 0.557 | 0.451 | 0.225902525712 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2096 | likely_benign | 0.2217 | benign | -0.35 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
N/C | 0.2491 | likely_benign | 0.273 | benign | 0.497 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
N/D | 0.2817 | likely_benign | 0.3024 | benign | -0.084 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.508422098 | None | None | I |
N/E | 0.6145 | likely_pathogenic | 0.6627 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
N/F | 0.4967 | ambiguous | 0.5269 | ambiguous | -0.665 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
N/G | 0.2618 | likely_benign | 0.2664 | benign | -0.539 | Destabilizing | 0.999 | D | 0.574 | neutral | None | None | None | None | I |
N/H | 0.1269 | likely_benign | 0.1318 | benign | -0.625 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.496926368 | None | None | I |
N/I | 0.2641 | likely_benign | 0.295 | benign | 0.067 | Stabilizing | 1.0 | D | 0.845 | deleterious | N | 0.488025598 | None | None | I |
N/K | 0.5233 | ambiguous | 0.5653 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.471290648 | None | None | I |
N/L | 0.2743 | likely_benign | 0.3121 | benign | 0.067 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
N/M | 0.3409 | ambiguous | 0.3675 | ambiguous | 0.529 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
N/P | 0.7343 | likely_pathogenic | 0.7585 | pathogenic | -0.045 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
N/Q | 0.4388 | ambiguous | 0.4794 | ambiguous | -0.353 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
N/R | 0.5242 | ambiguous | 0.5455 | ambiguous | 0.078 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/S | 0.085 | likely_benign | 0.0857 | benign | -0.107 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.511867835 | None | None | I |
N/T | 0.1558 | likely_benign | 0.172 | benign | -0.004 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | D | 0.528472083 | None | None | I |
N/V | 0.2232 | likely_benign | 0.25 | benign | -0.045 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
N/W | 0.8029 | likely_pathogenic | 0.8309 | pathogenic | -0.651 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
N/Y | 0.1893 | likely_benign | 0.2038 | benign | -0.402 | Destabilizing | 1.0 | D | 0.816 | deleterious | D | 0.526640418 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.