Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26501 | 79726;79727;79728 | chr2:178566631;178566630;178566629 | chr2:179431358;179431357;179431356 |
N2AB | 24860 | 74803;74804;74805 | chr2:178566631;178566630;178566629 | chr2:179431358;179431357;179431356 |
N2A | 23933 | 72022;72023;72024 | chr2:178566631;178566630;178566629 | chr2:179431358;179431357;179431356 |
N2B | 17436 | 52531;52532;52533 | chr2:178566631;178566630;178566629 | chr2:179431358;179431357;179431356 |
Novex-1 | 17561 | 52906;52907;52908 | chr2:178566631;178566630;178566629 | chr2:179431358;179431357;179431356 |
Novex-2 | 17628 | 53107;53108;53109 | chr2:178566631;178566630;178566629 | chr2:179431358;179431357;179431356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1310766903 | None | 0.41 | N | 0.473 | 0.25 | 0.288352970974 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1310766903 | None | 0.41 | N | 0.473 | 0.25 | 0.288352970974 | gnomAD-4.0.0 | 6.57505E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4708E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4584 | ambiguous | 0.4089 | ambiguous | -0.181 | Destabilizing | 0.648 | D | 0.546 | neutral | None | None | None | None | N |
K/C | 0.668 | likely_pathogenic | 0.6584 | pathogenic | -0.208 | Destabilizing | 0.993 | D | 0.79 | deleterious | None | None | None | None | N |
K/D | 0.8142 | likely_pathogenic | 0.7691 | pathogenic | -0.213 | Destabilizing | 0.866 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/E | 0.3482 | ambiguous | 0.3071 | benign | -0.205 | Destabilizing | 0.41 | N | 0.473 | neutral | N | 0.515726498 | None | None | N |
K/F | 0.9126 | likely_pathogenic | 0.891 | pathogenic | -0.457 | Destabilizing | 0.98 | D | 0.779 | deleterious | None | None | None | None | N |
K/G | 0.5033 | ambiguous | 0.4723 | ambiguous | -0.415 | Destabilizing | 0.866 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/H | 0.4159 | ambiguous | 0.3811 | ambiguous | -0.892 | Destabilizing | 0.98 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/I | 0.6309 | likely_pathogenic | 0.5658 | pathogenic | 0.364 | Stabilizing | 0.908 | D | 0.793 | deleterious | N | 0.504552328 | None | None | N |
K/L | 0.5925 | likely_pathogenic | 0.5488 | ambiguous | 0.364 | Stabilizing | 0.866 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/M | 0.4507 | ambiguous | 0.4096 | ambiguous | 0.51 | Stabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/N | 0.6371 | likely_pathogenic | 0.576 | pathogenic | 0.097 | Stabilizing | 0.83 | D | 0.695 | prob.neutral | N | 0.465163813 | None | None | N |
K/P | 0.797 | likely_pathogenic | 0.7475 | pathogenic | 0.211 | Stabilizing | 0.929 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/Q | 0.1794 | likely_benign | 0.1651 | benign | -0.209 | Destabilizing | 0.83 | D | 0.692 | prob.neutral | N | 0.480825759 | None | None | N |
K/R | 0.0649 | likely_benign | 0.0673 | benign | -0.07 | Destabilizing | 0.01 | N | 0.289 | neutral | N | 0.468956845 | None | None | N |
K/S | 0.5507 | ambiguous | 0.4938 | ambiguous | -0.445 | Destabilizing | 0.648 | D | 0.592 | neutral | None | None | None | None | N |
K/T | 0.3797 | ambiguous | 0.3197 | benign | -0.281 | Destabilizing | 0.83 | D | 0.681 | prob.neutral | N | 0.475012408 | None | None | N |
K/V | 0.5373 | ambiguous | 0.474 | ambiguous | 0.211 | Stabilizing | 0.866 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/W | 0.8257 | likely_pathogenic | 0.8107 | pathogenic | -0.387 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
K/Y | 0.7797 | likely_pathogenic | 0.75 | pathogenic | -0.008 | Destabilizing | 0.929 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.