Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26502 | 79729;79730;79731 | chr2:178566628;178566627;178566626 | chr2:179431355;179431354;179431353 |
N2AB | 24861 | 74806;74807;74808 | chr2:178566628;178566627;178566626 | chr2:179431355;179431354;179431353 |
N2A | 23934 | 72025;72026;72027 | chr2:178566628;178566627;178566626 | chr2:179431355;179431354;179431353 |
N2B | 17437 | 52534;52535;52536 | chr2:178566628;178566627;178566626 | chr2:179431355;179431354;179431353 |
Novex-1 | 17562 | 52909;52910;52911 | chr2:178566628;178566627;178566626 | chr2:179431355;179431354;179431353 |
Novex-2 | 17629 | 53110;53111;53112 | chr2:178566628;178566627;178566626 | chr2:179431355;179431354;179431353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1423556952 | -0.106 | None | N | 0.059 | 0.157 | 0.119812018005 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
N/D | rs1423556952 | -0.106 | None | N | 0.059 | 0.157 | 0.119812018005 | gnomAD-4.0.0 | 9.56319E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.71535E-05 | 0 | 0 |
N/T | rs1705971546 | None | 0.062 | N | 0.271 | 0.052 | 0.115124310173 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07641E-04 | 0 |
N/T | rs1705971546 | None | 0.062 | N | 0.271 | 0.052 | 0.115124310173 | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07641E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.191 | likely_benign | 0.1522 | benign | -0.761 | Destabilizing | 0.035 | N | 0.305 | neutral | None | None | None | None | N |
N/C | 0.1804 | likely_benign | 0.1483 | benign | -0.048 | Destabilizing | 0.824 | D | 0.381 | neutral | None | None | None | None | N |
N/D | 0.1021 | likely_benign | 0.0923 | benign | -0.96 | Destabilizing | None | N | 0.059 | neutral | N | 0.442194319 | None | None | N |
N/E | 0.2938 | likely_benign | 0.2459 | benign | -0.933 | Destabilizing | 0.035 | N | 0.281 | neutral | None | None | None | None | N |
N/F | 0.4129 | ambiguous | 0.3455 | ambiguous | -0.937 | Destabilizing | 0.555 | D | 0.386 | neutral | None | None | None | None | N |
N/G | 0.2293 | likely_benign | 0.1931 | benign | -1.003 | Destabilizing | 0.035 | N | 0.323 | neutral | None | None | None | None | N |
N/H | 0.0929 | likely_benign | 0.084 | benign | -0.925 | Destabilizing | 0.484 | N | 0.407 | neutral | N | 0.482888935 | None | None | N |
N/I | 0.2831 | likely_benign | 0.2371 | benign | -0.18 | Destabilizing | 0.317 | N | 0.403 | neutral | N | 0.491932256 | None | None | N |
N/K | 0.2746 | likely_benign | 0.2176 | benign | -0.157 | Destabilizing | 0.062 | N | 0.294 | neutral | N | 0.471055788 | None | None | N |
N/L | 0.2593 | likely_benign | 0.2144 | benign | -0.18 | Destabilizing | 0.149 | N | 0.401 | neutral | None | None | None | None | N |
N/M | 0.2831 | likely_benign | 0.2301 | benign | 0.485 | Stabilizing | 0.935 | D | 0.355 | neutral | None | None | None | None | N |
N/P | 0.8788 | likely_pathogenic | 0.8546 | pathogenic | -0.347 | Destabilizing | 0.38 | N | 0.384 | neutral | None | None | None | None | N |
N/Q | 0.2611 | likely_benign | 0.215 | benign | -1.006 | Destabilizing | 0.38 | N | 0.369 | neutral | None | None | None | None | N |
N/R | 0.3211 | likely_benign | 0.2647 | benign | 0.029 | Stabilizing | 0.38 | N | 0.365 | neutral | None | None | None | None | N |
N/S | 0.0706 | likely_benign | 0.0646 | benign | -0.692 | Destabilizing | None | N | 0.076 | neutral | N | 0.398056752 | None | None | N |
N/T | 0.0836 | likely_benign | 0.0725 | benign | -0.506 | Destabilizing | 0.062 | N | 0.271 | neutral | N | 0.428606159 | None | None | N |
N/V | 0.265 | likely_benign | 0.2212 | benign | -0.347 | Destabilizing | 0.38 | N | 0.411 | neutral | None | None | None | None | N |
N/W | 0.6866 | likely_pathogenic | 0.6328 | pathogenic | -0.742 | Destabilizing | 0.935 | D | 0.543 | neutral | None | None | None | None | N |
N/Y | 0.1206 | likely_benign | 0.1114 | benign | -0.489 | Destabilizing | 0.484 | N | 0.365 | neutral | N | 0.469055061 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.