Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2650779744;79745;79746 chr2:178566613;178566612;178566611chr2:179431340;179431339;179431338
N2AB2486674821;74822;74823 chr2:178566613;178566612;178566611chr2:179431340;179431339;179431338
N2A2393972040;72041;72042 chr2:178566613;178566612;178566611chr2:179431340;179431339;179431338
N2B1744252549;52550;52551 chr2:178566613;178566612;178566611chr2:179431340;179431339;179431338
Novex-11756752924;52925;52926 chr2:178566613;178566612;178566611chr2:179431340;179431339;179431338
Novex-21763453125;53126;53127 chr2:178566613;178566612;178566611chr2:179431340;179431339;179431338
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: A
  • RefSeq wild type transcript codon: GCC
  • RefSeq wild type template codon: CGG
  • Domain: Fn3-81
  • Domain position: 21
  • Structural Position: 23
  • Q(SASA): 0.1606
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
A/D rs538057461 -2.199 0.782 N 0.679 0.266 0.508046185061 gnomAD-2.1.1 1.08E-05 None None None None N None 0 5.66E-05 None 0 0 None 0 None 0 0 1.40607E-04
A/D rs538057461 -2.199 0.782 N 0.679 0.266 0.508046185061 gnomAD-3.1.2 7.89E-05 None None None None N None 0 7.87092E-04 0 0 0 None 0 0 0 0 0
A/D rs538057461 -2.199 0.782 N 0.679 0.266 0.508046185061 1000 genomes 1.99681E-04 None None None None N None 0 1.4E-03 None None 0 0 None None None 0 None
A/D rs538057461 -2.199 0.782 N 0.679 0.266 0.508046185061 gnomAD-4.0.0 2.69459E-05 None None None None N None 0 2.88145E-04 None 0 0 None 0 0 0 0 1.13766E-04
A/S None None 0.038 N 0.481 0.056 0.0954503805726 gnomAD-4.0.0 1.36955E-06 None None None None N None 0 0 None 0 0 None 0 0 1.79906E-06 0 0
A/T rs554718474 -0.83 0.007 N 0.456 0.065 0.146414634003 gnomAD-2.1.1 1.43E-05 None None None None N None 0 5.66E-05 None 0 0 None 0 None 0 7.83E-06 1.40647E-04
A/T rs554718474 -0.83 0.007 N 0.456 0.065 0.146414634003 gnomAD-3.1.2 7.89E-05 None None None None N None 0 7.86885E-04 0 0 0 None 0 0 0 0 0
A/T rs554718474 -0.83 0.007 N 0.456 0.065 0.146414634003 1000 genomes 1.99681E-04 None None None None N None 0 1.4E-03 None None 0 0 None None None 0 None
A/T rs554718474 -0.83 0.007 N 0.456 0.065 0.146414634003 gnomAD-4.0.0 1.55037E-05 None None None None N None 0 2.8339E-04 None 0 0 None 0 0 3.39075E-06 0 6.40451E-05
A/V rs538057461 0.57 0.007 N 0.437 0.163 0.298403945805 gnomAD-2.1.1 4.04E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.91E-06 0
A/V rs538057461 0.57 0.007 N 0.437 0.163 0.298403945805 gnomAD-4.0.0 1.59444E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85891E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
A/C 0.3043 likely_benign 0.2935 benign -1.043 Destabilizing 0.973 D 0.629 neutral None None None None N
A/D 0.4671 ambiguous 0.3925 ambiguous -2.585 Highly Destabilizing 0.782 D 0.679 prob.neutral N 0.482307016 None None N
A/E 0.3519 ambiguous 0.3067 benign -2.428 Highly Destabilizing 0.826 D 0.675 prob.neutral None None None None N
A/F 0.3018 likely_benign 0.2457 benign -0.785 Destabilizing 0.906 D 0.745 deleterious None None None None N
A/G 0.099 likely_benign 0.1022 benign -1.51 Destabilizing 0.003 N 0.493 neutral N 0.475960176 None None N
A/H 0.4877 ambiguous 0.4446 ambiguous -2.108 Highly Destabilizing 0.991 D 0.732 prob.delet. None None None None N
A/I 0.2251 likely_benign 0.169 benign 0.041 Stabilizing 0.704 D 0.675 neutral None None None None N
A/K 0.5778 likely_pathogenic 0.5086 ambiguous -1.362 Destabilizing 0.826 D 0.676 prob.neutral None None None None N
A/L 0.1649 likely_benign 0.1353 benign 0.041 Stabilizing 0.404 N 0.61 neutral None None None None N
A/M 0.2048 likely_benign 0.1643 benign -0.052 Destabilizing 0.973 D 0.696 prob.neutral None None None None N
A/N 0.2706 likely_benign 0.2234 benign -1.56 Destabilizing 0.826 D 0.687 prob.neutral None None None None N
A/P 0.884 likely_pathogenic 0.8613 pathogenic -0.293 Destabilizing 0.879 D 0.695 prob.neutral N 0.498462715 None None N
A/Q 0.3526 ambiguous 0.323 benign -1.419 Destabilizing 0.906 D 0.708 prob.delet. None None None None N
A/R 0.5026 ambiguous 0.4463 ambiguous -1.36 Destabilizing 0.826 D 0.693 prob.neutral None None None None N
A/S 0.0821 likely_benign 0.079 benign -1.869 Destabilizing 0.038 N 0.481 neutral N 0.414655427 None None N
A/T 0.084 likely_benign 0.0765 benign -1.613 Destabilizing 0.007 N 0.456 neutral N 0.473879876 None None N
A/V 0.136 likely_benign 0.1088 benign -0.293 Destabilizing 0.007 N 0.437 neutral N 0.519847026 None None N
A/W 0.7128 likely_pathogenic 0.6829 pathogenic -1.645 Destabilizing 0.991 D 0.789 deleterious None None None None N
A/Y 0.4276 ambiguous 0.3834 ambiguous -1.094 Destabilizing 0.906 D 0.747 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.