Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26509 | 79750;79751;79752 | chr2:178566607;178566606;178566605 | chr2:179431334;179431333;179431332 |
N2AB | 24868 | 74827;74828;74829 | chr2:178566607;178566606;178566605 | chr2:179431334;179431333;179431332 |
N2A | 23941 | 72046;72047;72048 | chr2:178566607;178566606;178566605 | chr2:179431334;179431333;179431332 |
N2B | 17444 | 52555;52556;52557 | chr2:178566607;178566606;178566605 | chr2:179431334;179431333;179431332 |
Novex-1 | 17569 | 52930;52931;52932 | chr2:178566607;178566606;178566605 | chr2:179431334;179431333;179431332 |
Novex-2 | 17636 | 53131;53132;53133 | chr2:178566607;178566606;178566605 | chr2:179431334;179431333;179431332 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1705957839 | None | 0.062 | N | 0.474 | 0.207 | 0.158396225186 | gnomAD-4.0.0 | 1.59437E-06 | None | None | None | None | I | None | 5.66059E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/S | rs1311507525 | -1.028 | None | N | 0.249 | 0.055 | 0.0666544352282 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
G/S | rs1311507525 | -1.028 | None | N | 0.249 | 0.055 | 0.0666544352282 | gnomAD-4.0.0 | 1.16413E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52921E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1254 | likely_benign | 0.1229 | benign | -0.697 | Destabilizing | 0.027 | N | 0.408 | neutral | N | 0.452659241 | None | None | I |
G/C | 0.1561 | likely_benign | 0.1576 | benign | -0.895 | Destabilizing | 0.78 | D | 0.593 | neutral | N | 0.492217707 | None | None | I |
G/D | 0.4556 | ambiguous | 0.4666 | ambiguous | -2.002 | Highly Destabilizing | 0.062 | N | 0.474 | neutral | N | 0.414986288 | None | None | I |
G/E | 0.4043 | ambiguous | 0.4331 | ambiguous | -1.916 | Destabilizing | 0.081 | N | 0.5 | neutral | None | None | None | None | I |
G/F | 0.6441 | likely_pathogenic | 0.6313 | pathogenic | -0.884 | Destabilizing | 0.555 | D | 0.598 | neutral | None | None | None | None | I |
G/H | 0.4831 | ambiguous | 0.488 | ambiguous | -1.919 | Destabilizing | 0.001 | N | 0.402 | neutral | None | None | None | None | I |
G/I | 0.3059 | likely_benign | 0.2928 | benign | 0.165 | Stabilizing | 0.38 | N | 0.598 | neutral | None | None | None | None | I |
G/K | 0.6631 | likely_pathogenic | 0.6986 | pathogenic | -1.348 | Destabilizing | 0.081 | N | 0.506 | neutral | None | None | None | None | I |
G/L | 0.4098 | ambiguous | 0.4103 | ambiguous | 0.165 | Stabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | I |
G/M | 0.4281 | ambiguous | 0.438 | ambiguous | 0.16 | Stabilizing | 0.935 | D | 0.588 | neutral | None | None | None | None | I |
G/N | 0.2443 | likely_benign | 0.2422 | benign | -1.318 | Destabilizing | 0.081 | N | 0.473 | neutral | None | None | None | None | I |
G/P | 0.945 | likely_pathogenic | 0.9464 | pathogenic | -0.078 | Destabilizing | 0.38 | N | 0.557 | neutral | None | None | None | None | I |
G/Q | 0.423 | ambiguous | 0.4474 | ambiguous | -1.271 | Destabilizing | 0.38 | N | 0.557 | neutral | None | None | None | None | I |
G/R | 0.5238 | ambiguous | 0.5546 | ambiguous | -1.313 | Destabilizing | 0.317 | N | 0.557 | neutral | N | 0.445751912 | None | None | I |
G/S | 0.0759 | likely_benign | 0.0744 | benign | -1.57 | Destabilizing | None | N | 0.249 | neutral | N | 0.389722484 | None | None | I |
G/T | 0.1371 | likely_benign | 0.1386 | benign | -1.384 | Destabilizing | 0.081 | N | 0.498 | neutral | None | None | None | None | I |
G/V | 0.2117 | likely_benign | 0.1979 | benign | -0.078 | Destabilizing | 0.317 | N | 0.575 | neutral | N | 0.45937457 | None | None | I |
G/W | 0.5335 | ambiguous | 0.5613 | ambiguous | -1.642 | Destabilizing | 0.935 | D | 0.597 | neutral | None | None | None | None | I |
G/Y | 0.4834 | ambiguous | 0.4791 | ambiguous | -1.052 | Destabilizing | 0.38 | N | 0.579 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.