Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2651 | 8176;8177;8178 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
N2AB | 2651 | 8176;8177;8178 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
N2A | 2651 | 8176;8177;8178 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
N2B | 2605 | 8038;8039;8040 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
Novex-1 | 2605 | 8038;8039;8040 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
Novex-2 | 2605 | 8038;8039;8040 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
Novex-3 | 2651 | 8176;8177;8178 | chr2:178771376;178771375;178771374 | chr2:179636103;179636102;179636101 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs770388400 | -1.176 | 0.019 | N | 0.162 | 0.257 | 0.314417295294 | gnomAD-2.1.1 | 2.39E-05 | None | None | None | None | N | None | 1.23031E-04 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 1.63185E-04 |
E/K | rs770388400 | -1.176 | 0.019 | N | 0.162 | 0.257 | 0.314417295294 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs770388400 | -1.176 | 0.019 | N | 0.162 | 0.257 | 0.314417295294 | gnomAD-4.0.0 | 1.85882E-05 | None | None | None | None | N | None | 4.00374E-05 | 0 | None | 0 | 2.22906E-05 | None | 0 | 1.6442E-04 | 1.52545E-05 | 5.48992E-05 | 3.20092E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.172 | likely_benign | 0.18 | benign | -0.709 | Destabilizing | 0.425 | N | 0.44 | neutral | N | 0.505467566 | None | None | N |
E/C | 0.7791 | likely_pathogenic | 0.7964 | pathogenic | -0.505 | Destabilizing | 0.995 | D | 0.564 | neutral | None | None | None | None | N |
E/D | 0.1725 | likely_benign | 0.1877 | benign | -1.17 | Destabilizing | 0.425 | N | 0.454 | neutral | N | 0.501966768 | None | None | N |
E/F | 0.6009 | likely_pathogenic | 0.6248 | pathogenic | 0.148 | Stabilizing | 0.944 | D | 0.563 | neutral | None | None | None | None | N |
E/G | 0.2261 | likely_benign | 0.2375 | benign | -1.121 | Destabilizing | 0.425 | N | 0.519 | neutral | N | 0.507214285 | None | None | N |
E/H | 0.357 | ambiguous | 0.3685 | ambiguous | -0.106 | Destabilizing | 0.007 | N | 0.313 | neutral | None | None | None | None | N |
E/I | 0.2098 | likely_benign | 0.2204 | benign | 0.433 | Stabilizing | 0.944 | D | 0.585 | neutral | None | None | None | None | N |
E/K | 0.1099 | likely_benign | 0.1154 | benign | -0.802 | Destabilizing | 0.019 | N | 0.162 | neutral | N | 0.411968541 | None | None | N |
E/L | 0.2898 | likely_benign | 0.297 | benign | 0.433 | Stabilizing | 0.704 | D | 0.555 | neutral | None | None | None | None | N |
E/M | 0.33 | likely_benign | 0.3452 | ambiguous | 0.831 | Stabilizing | 0.944 | D | 0.529 | neutral | None | None | None | None | N |
E/N | 0.2382 | likely_benign | 0.2652 | benign | -1.358 | Destabilizing | 0.704 | D | 0.503 | neutral | None | None | None | None | N |
E/P | 0.936 | likely_pathogenic | 0.9141 | pathogenic | 0.074 | Stabilizing | 0.828 | D | 0.521 | neutral | None | None | None | None | N |
E/Q | 0.1106 | likely_benign | 0.1152 | benign | -1.154 | Destabilizing | 0.025 | N | 0.159 | neutral | N | 0.435068397 | None | None | N |
E/R | 0.2025 | likely_benign | 0.2057 | benign | -0.42 | Destabilizing | 0.007 | N | 0.161 | neutral | None | None | None | None | N |
E/S | 0.1992 | likely_benign | 0.2155 | benign | -1.704 | Destabilizing | 0.495 | N | 0.468 | neutral | None | None | None | None | N |
E/T | 0.1768 | likely_benign | 0.1948 | benign | -1.357 | Destabilizing | 0.704 | D | 0.545 | neutral | None | None | None | None | N |
E/V | 0.1484 | likely_benign | 0.1534 | benign | 0.074 | Stabilizing | 0.784 | D | 0.547 | neutral | N | 0.496805697 | None | None | N |
E/W | 0.8247 | likely_pathogenic | 0.8353 | pathogenic | 0.406 | Stabilizing | 0.995 | D | 0.579 | neutral | None | None | None | None | N |
E/Y | 0.4973 | ambiguous | 0.5132 | ambiguous | 0.392 | Stabilizing | 0.893 | D | 0.55 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.