Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26522 | 79789;79790;79791 | chr2:178566568;178566567;178566566 | chr2:179431295;179431294;179431293 |
N2AB | 24881 | 74866;74867;74868 | chr2:178566568;178566567;178566566 | chr2:179431295;179431294;179431293 |
N2A | 23954 | 72085;72086;72087 | chr2:178566568;178566567;178566566 | chr2:179431295;179431294;179431293 |
N2B | 17457 | 52594;52595;52596 | chr2:178566568;178566567;178566566 | chr2:179431295;179431294;179431293 |
Novex-1 | 17582 | 52969;52970;52971 | chr2:178566568;178566567;178566566 | chr2:179431295;179431294;179431293 |
Novex-2 | 17649 | 53170;53171;53172 | chr2:178566568;178566567;178566566 | chr2:179431295;179431294;179431293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.827 | 0.836 | 0.821884243264 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85874E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9928 | likely_pathogenic | 0.9921 | pathogenic | -3.396 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Y/C | 0.8533 | likely_pathogenic | 0.8251 | pathogenic | -1.855 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.653678792 | None | None | N |
Y/D | 0.9931 | likely_pathogenic | 0.9929 | pathogenic | -3.784 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.653880596 | None | None | N |
Y/E | 0.998 | likely_pathogenic | 0.9981 | pathogenic | -3.563 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/F | 0.2553 | likely_benign | 0.2512 | benign | -1.306 | Destabilizing | 0.999 | D | 0.646 | neutral | D | 0.532485401 | None | None | N |
Y/G | 0.9836 | likely_pathogenic | 0.984 | pathogenic | -3.812 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Y/H | 0.959 | likely_pathogenic | 0.959 | pathogenic | -2.481 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.653476988 | None | None | N |
Y/I | 0.9663 | likely_pathogenic | 0.963 | pathogenic | -1.988 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Y/K | 0.9979 | likely_pathogenic | 0.998 | pathogenic | -2.438 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/L | 0.942 | likely_pathogenic | 0.9397 | pathogenic | -1.988 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
Y/M | 0.9724 | likely_pathogenic | 0.9695 | pathogenic | -1.69 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Y/N | 0.9481 | likely_pathogenic | 0.947 | pathogenic | -3.261 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.653880596 | None | None | N |
Y/P | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -2.476 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Y/Q | 0.9969 | likely_pathogenic | 0.9968 | pathogenic | -2.984 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Y/R | 0.9929 | likely_pathogenic | 0.993 | pathogenic | -2.233 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Y/S | 0.9713 | likely_pathogenic | 0.9681 | pathogenic | -3.564 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.653880596 | None | None | N |
Y/T | 0.99 | likely_pathogenic | 0.9891 | pathogenic | -3.223 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/V | 0.9408 | likely_pathogenic | 0.9334 | pathogenic | -2.476 | Highly Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
Y/W | 0.8284 | likely_pathogenic | 0.8053 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.