Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26523 | 79792;79793;79794 | chr2:178566565;178566564;178566563 | chr2:179431292;179431291;179431290 |
N2AB | 24882 | 74869;74870;74871 | chr2:178566565;178566564;178566563 | chr2:179431292;179431291;179431290 |
N2A | 23955 | 72088;72089;72090 | chr2:178566565;178566564;178566563 | chr2:179431292;179431291;179431290 |
N2B | 17458 | 52597;52598;52599 | chr2:178566565;178566564;178566563 | chr2:179431292;179431291;179431290 |
Novex-1 | 17583 | 52972;52973;52974 | chr2:178566565;178566564;178566563 | chr2:179431292;179431291;179431290 |
Novex-2 | 17650 | 53173;53174;53175 | chr2:178566565;178566564;178566563 | chr2:179431292;179431291;179431290 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.001 | N | 0.319 | 0.206 | 0.606876268242 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1473 | likely_benign | 0.1468 | benign | -2.169 | Highly Destabilizing | 0.001 | N | 0.319 | neutral | N | 0.511360828 | None | None | N |
V/C | 0.5361 | ambiguous | 0.5789 | pathogenic | -1.883 | Destabilizing | 0.935 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/D | 0.5861 | likely_pathogenic | 0.6361 | pathogenic | -2.788 | Highly Destabilizing | 0.555 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/E | 0.3643 | ambiguous | 0.415 | ambiguous | -2.583 | Highly Destabilizing | 0.484 | N | 0.649 | neutral | N | 0.514782349 | None | None | N |
V/F | 0.1594 | likely_benign | 0.1745 | benign | -1.266 | Destabilizing | 0.235 | N | 0.695 | prob.neutral | None | None | None | None | N |
V/G | 0.3261 | likely_benign | 0.3362 | benign | -2.685 | Highly Destabilizing | 0.117 | N | 0.629 | neutral | N | 0.491283465 | None | None | N |
V/H | 0.4497 | ambiguous | 0.5223 | ambiguous | -2.364 | Highly Destabilizing | 0.935 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/I | 0.0669 | likely_benign | 0.0673 | benign | -0.732 | Destabilizing | None | N | 0.317 | neutral | N | 0.426224789 | None | None | N |
V/K | 0.3147 | likely_benign | 0.3896 | ambiguous | -1.807 | Destabilizing | 0.149 | N | 0.652 | neutral | None | None | None | None | N |
V/L | 0.1185 | likely_benign | 0.1268 | benign | -0.732 | Destabilizing | None | N | 0.297 | neutral | N | 0.475093384 | None | None | N |
V/M | 0.092 | likely_benign | 0.0937 | benign | -0.936 | Destabilizing | 0.005 | N | 0.515 | neutral | None | None | None | None | N |
V/N | 0.318 | likely_benign | 0.3586 | ambiguous | -2.116 | Highly Destabilizing | 0.555 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/P | 0.9628 | likely_pathogenic | 0.9652 | pathogenic | -1.185 | Destabilizing | 0.555 | D | 0.653 | neutral | None | None | None | None | N |
V/Q | 0.2818 | likely_benign | 0.3332 | benign | -1.986 | Destabilizing | 0.555 | D | 0.649 | neutral | None | None | None | None | N |
V/R | 0.2617 | likely_benign | 0.327 | benign | -1.603 | Destabilizing | 0.38 | N | 0.681 | prob.neutral | None | None | None | None | N |
V/S | 0.2034 | likely_benign | 0.215 | benign | -2.727 | Highly Destabilizing | 0.081 | N | 0.62 | neutral | None | None | None | None | N |
V/T | 0.1394 | likely_benign | 0.1417 | benign | -2.384 | Highly Destabilizing | 0.149 | N | 0.687 | prob.neutral | None | None | None | None | N |
V/W | 0.6928 | likely_pathogenic | 0.7346 | pathogenic | -1.742 | Destabilizing | 0.935 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/Y | 0.4148 | ambiguous | 0.4688 | ambiguous | -1.394 | Destabilizing | 0.555 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.