Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26525 | 79798;79799;79800 | chr2:178566559;178566558;178566557 | chr2:179431286;179431285;179431284 |
N2AB | 24884 | 74875;74876;74877 | chr2:178566559;178566558;178566557 | chr2:179431286;179431285;179431284 |
N2A | 23957 | 72094;72095;72096 | chr2:178566559;178566558;178566557 | chr2:179431286;179431285;179431284 |
N2B | 17460 | 52603;52604;52605 | chr2:178566559;178566558;178566557 | chr2:179431286;179431285;179431284 |
Novex-1 | 17585 | 52978;52979;52980 | chr2:178566559;178566558;178566557 | chr2:179431286;179431285;179431284 |
Novex-2 | 17652 | 53179;53180;53181 | chr2:178566559;178566558;178566557 | chr2:179431286;179431285;179431284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs760756282 | -2.421 | 1.0 | D | 0.782 | 0.589 | 0.477298106951 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs760756282 | -2.421 | 1.0 | D | 0.782 | 0.589 | 0.477298106951 | gnomAD-4.0.0 | 2.73782E-06 | None | None | None | None | N | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 2.69853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5462 | ambiguous | 0.6481 | pathogenic | -1.5 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | D | 0.537989361 | None | None | N |
E/C | 0.9633 | likely_pathogenic | 0.9747 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
E/D | 0.6899 | likely_pathogenic | 0.7375 | pathogenic | -1.797 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.50878229 | None | None | N |
E/F | 0.9694 | likely_pathogenic | 0.9815 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/G | 0.6777 | likely_pathogenic | 0.7579 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.539763788 | None | None | N |
E/H | 0.8785 | likely_pathogenic | 0.9203 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/I | 0.9267 | likely_pathogenic | 0.943 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/K | 0.7418 | likely_pathogenic | 0.7968 | pathogenic | -1.559 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.511869709 | None | None | N |
E/L | 0.899 | likely_pathogenic | 0.9293 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/M | 0.8536 | likely_pathogenic | 0.8934 | pathogenic | 0.306 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/N | 0.854 | likely_pathogenic | 0.8795 | pathogenic | -1.784 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/P | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/Q | 0.2977 | likely_benign | 0.3658 | ambiguous | -1.478 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.469722943 | None | None | N |
E/R | 0.8389 | likely_pathogenic | 0.8833 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/S | 0.617 | likely_pathogenic | 0.6838 | pathogenic | -2.379 | Highly Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/T | 0.8294 | likely_pathogenic | 0.8627 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.8286 | likely_pathogenic | 0.8616 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.520645575 | None | None | N |
E/W | 0.9898 | likely_pathogenic | 0.9942 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/Y | 0.9408 | likely_pathogenic | 0.9631 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.