Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26526 | 79801;79802;79803 | chr2:178566556;178566555;178566554 | chr2:179431283;179431282;179431281 |
N2AB | 24885 | 74878;74879;74880 | chr2:178566556;178566555;178566554 | chr2:179431283;179431282;179431281 |
N2A | 23958 | 72097;72098;72099 | chr2:178566556;178566555;178566554 | chr2:179431283;179431282;179431281 |
N2B | 17461 | 52606;52607;52608 | chr2:178566556;178566555;178566554 | chr2:179431283;179431282;179431281 |
Novex-1 | 17586 | 52981;52982;52983 | chr2:178566556;178566555;178566554 | chr2:179431283;179431282;179431281 |
Novex-2 | 17653 | 53182;53183;53184 | chr2:178566556;178566555;178566554 | chr2:179431283;179431282;179431281 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.117 | N | 0.781 | 0.322 | 0.684497691411 | gnomAD-4.0.0 | 3.18506E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89775E-05 | 0 | 2.85871E-06 | 0 | 0 |
I/V | None | None | 0.012 | N | 0.447 | 0.054 | 0.343788945184 | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4076 | ambiguous | 0.3411 | ambiguous | -2.124 | Highly Destabilizing | 0.081 | N | 0.735 | prob.delet. | None | None | None | None | N |
I/C | 0.6199 | likely_pathogenic | 0.5723 | pathogenic | -1.14 | Destabilizing | 0.935 | D | 0.772 | deleterious | None | None | None | None | N |
I/D | 0.8925 | likely_pathogenic | 0.8434 | pathogenic | -2.676 | Highly Destabilizing | 0.791 | D | 0.814 | deleterious | None | None | None | None | N |
I/E | 0.7733 | likely_pathogenic | 0.6946 | pathogenic | -2.364 | Highly Destabilizing | 0.555 | D | 0.821 | deleterious | None | None | None | None | N |
I/F | 0.1471 | likely_benign | 0.1401 | benign | -1.267 | Destabilizing | 0.001 | N | 0.465 | neutral | N | 0.471938436 | None | None | N |
I/G | 0.7575 | likely_pathogenic | 0.6949 | pathogenic | -2.728 | Highly Destabilizing | 0.555 | D | 0.802 | deleterious | None | None | None | None | N |
I/H | 0.6221 | likely_pathogenic | 0.5543 | ambiguous | -2.529 | Highly Destabilizing | 0.935 | D | 0.792 | deleterious | None | None | None | None | N |
I/K | 0.4493 | ambiguous | 0.3734 | ambiguous | -1.419 | Destabilizing | 0.38 | N | 0.812 | deleterious | None | None | None | None | N |
I/L | 0.107 | likely_benign | 0.1039 | benign | -0.335 | Destabilizing | None | N | 0.247 | neutral | N | 0.476016104 | None | None | N |
I/M | 0.0854 | likely_benign | 0.0834 | benign | -0.362 | Destabilizing | 0.004 | N | 0.481 | neutral | N | 0.437961935 | None | None | N |
I/N | 0.4556 | ambiguous | 0.3752 | ambiguous | -2.059 | Highly Destabilizing | 0.484 | N | 0.815 | deleterious | N | 0.489410587 | None | None | N |
I/P | 0.9805 | likely_pathogenic | 0.9717 | pathogenic | -0.918 | Destabilizing | 0.791 | D | 0.812 | deleterious | None | None | None | None | N |
I/Q | 0.5938 | likely_pathogenic | 0.5073 | ambiguous | -1.715 | Destabilizing | 0.555 | D | 0.812 | deleterious | None | None | None | None | N |
I/R | 0.4124 | ambiguous | 0.3384 | benign | -1.579 | Destabilizing | 0.38 | N | 0.82 | deleterious | None | None | None | None | N |
I/S | 0.3958 | ambiguous | 0.3192 | benign | -2.648 | Highly Destabilizing | 0.317 | N | 0.779 | deleterious | N | 0.495258012 | None | None | N |
I/T | 0.2455 | likely_benign | 0.1747 | benign | -2.169 | Highly Destabilizing | 0.117 | N | 0.781 | deleterious | N | 0.480000558 | None | None | N |
I/V | 0.0911 | likely_benign | 0.0864 | benign | -0.918 | Destabilizing | 0.012 | N | 0.447 | neutral | N | 0.446213272 | None | None | N |
I/W | 0.7673 | likely_pathogenic | 0.7186 | pathogenic | -1.741 | Destabilizing | 0.935 | D | 0.793 | deleterious | None | None | None | None | N |
I/Y | 0.411 | ambiguous | 0.3829 | ambiguous | -1.375 | Destabilizing | 0.235 | N | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.