Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26530 | 79813;79814;79815 | chr2:178566544;178566543;178566542 | chr2:179431271;179431270;179431269 |
N2AB | 24889 | 74890;74891;74892 | chr2:178566544;178566543;178566542 | chr2:179431271;179431270;179431269 |
N2A | 23962 | 72109;72110;72111 | chr2:178566544;178566543;178566542 | chr2:179431271;179431270;179431269 |
N2B | 17465 | 52618;52619;52620 | chr2:178566544;178566543;178566542 | chr2:179431271;179431270;179431269 |
Novex-1 | 17590 | 52993;52994;52995 | chr2:178566544;178566543;178566542 | chr2:179431271;179431270;179431269 |
Novex-2 | 17657 | 53194;53195;53196 | chr2:178566544;178566543;178566542 | chr2:179431271;179431270;179431269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.983 | N | 0.591 | 0.419 | 0.36076525451 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85878E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0917 | likely_benign | 0.0973 | benign | -0.145 | Destabilizing | 0.805 | D | 0.436 | neutral | N | 0.462827802 | None | None | N |
D/C | 0.4127 | ambiguous | 0.4398 | ambiguous | 0.101 | Stabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
D/E | 0.0865 | likely_benign | 0.0902 | benign | -0.294 | Destabilizing | 0.025 | N | 0.305 | neutral | N | 0.414284494 | None | None | N |
D/F | 0.4494 | ambiguous | 0.4642 | ambiguous | -0.288 | Destabilizing | 0.999 | D | 0.572 | neutral | None | None | None | None | N |
D/G | 0.0884 | likely_benign | 0.0932 | benign | -0.29 | Destabilizing | 0.025 | N | 0.347 | neutral | N | 0.384574875 | None | None | N |
D/H | 0.1907 | likely_benign | 0.215 | benign | 0.027 | Stabilizing | 0.995 | D | 0.447 | neutral | N | 0.453249805 | None | None | N |
D/I | 0.2104 | likely_benign | 0.231 | benign | 0.174 | Stabilizing | 0.987 | D | 0.583 | neutral | None | None | None | None | N |
D/K | 0.1889 | likely_benign | 0.2184 | benign | 0.379 | Stabilizing | 0.845 | D | 0.414 | neutral | None | None | None | None | N |
D/L | 0.2288 | likely_benign | 0.2542 | benign | 0.174 | Stabilizing | 0.975 | D | 0.589 | neutral | None | None | None | None | N |
D/M | 0.3638 | ambiguous | 0.3818 | ambiguous | 0.238 | Stabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
D/N | 0.0731 | likely_benign | 0.0732 | benign | 0.251 | Stabilizing | 0.892 | D | 0.397 | neutral | N | 0.451666659 | None | None | N |
D/P | 0.3965 | ambiguous | 0.4447 | ambiguous | 0.088 | Stabilizing | 0.987 | D | 0.462 | neutral | None | None | None | None | N |
D/Q | 0.1888 | likely_benign | 0.2083 | benign | 0.234 | Stabilizing | 0.95 | D | 0.427 | neutral | None | None | None | None | N |
D/R | 0.2579 | likely_benign | 0.2892 | benign | 0.537 | Stabilizing | 0.975 | D | 0.513 | neutral | None | None | None | None | N |
D/S | 0.083 | likely_benign | 0.082 | benign | 0.124 | Stabilizing | 0.916 | D | 0.425 | neutral | None | None | None | None | N |
D/T | 0.1194 | likely_benign | 0.1255 | benign | 0.228 | Stabilizing | 0.975 | D | 0.413 | neutral | None | None | None | None | N |
D/V | 0.1295 | likely_benign | 0.1425 | benign | 0.088 | Stabilizing | 0.983 | D | 0.591 | neutral | N | 0.498615244 | None | None | N |
D/W | 0.7504 | likely_pathogenic | 0.7807 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
D/Y | 0.2023 | likely_benign | 0.2234 | benign | -0.065 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.456719299 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.