Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26532 | 79819;79820;79821 | chr2:178566538;178566537;178566536 | chr2:179431265;179431264;179431263 |
N2AB | 24891 | 74896;74897;74898 | chr2:178566538;178566537;178566536 | chr2:179431265;179431264;179431263 |
N2A | 23964 | 72115;72116;72117 | chr2:178566538;178566537;178566536 | chr2:179431265;179431264;179431263 |
N2B | 17467 | 52624;52625;52626 | chr2:178566538;178566537;178566536 | chr2:179431265;179431264;179431263 |
Novex-1 | 17592 | 52999;53000;53001 | chr2:178566538;178566537;178566536 | chr2:179431265;179431264;179431263 |
Novex-2 | 17659 | 53200;53201;53202 | chr2:178566538;178566537;178566536 | chr2:179431265;179431264;179431263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs964829504 | 0.633 | 0.645 | N | 0.557 | 0.284 | 0.315314060047 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs964829504 | 0.633 | 0.645 | N | 0.557 | 0.284 | 0.315314060047 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs964829504 | 0.633 | 0.645 | N | 0.557 | 0.284 | 0.315314060047 | gnomAD-4.0.0 | 3.09936E-06 | None | None | None | None | N | None | 0 | 5.00384E-05 | None | 0 | 0 | None | 0 | 3.28839E-04 | 0 | 0 | 0 |
E/Q | None | None | 0.864 | N | 0.526 | 0.285 | 0.339316883193 | gnomAD-4.0.0 | 6.84392E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99522E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1117 | likely_benign | 0.1285 | benign | -0.167 | Destabilizing | 0.645 | D | 0.551 | neutral | N | 0.47984863 | None | None | N |
E/C | 0.6997 | likely_pathogenic | 0.7583 | pathogenic | -0.244 | Destabilizing | 0.995 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/D | 0.072 | likely_benign | 0.0781 | benign | -0.222 | Destabilizing | 0.002 | N | 0.401 | neutral | N | 0.446968207 | None | None | N |
E/F | 0.6242 | likely_pathogenic | 0.6951 | pathogenic | -0.087 | Destabilizing | 0.995 | D | 0.63 | neutral | None | None | None | None | N |
E/G | 0.0991 | likely_benign | 0.1145 | benign | -0.317 | Destabilizing | 0.645 | D | 0.455 | neutral | N | 0.464241672 | None | None | N |
E/H | 0.3912 | ambiguous | 0.4852 | ambiguous | 0.474 | Stabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | N |
E/I | 0.2465 | likely_benign | 0.3038 | benign | 0.181 | Stabilizing | 0.945 | D | 0.637 | neutral | None | None | None | None | N |
E/K | 0.119 | likely_benign | 0.1549 | benign | 0.307 | Stabilizing | 0.645 | D | 0.557 | neutral | N | 0.476000248 | None | None | N |
E/L | 0.2593 | likely_benign | 0.3102 | benign | 0.181 | Stabilizing | 0.945 | D | 0.622 | neutral | None | None | None | None | N |
E/M | 0.3007 | likely_benign | 0.3488 | ambiguous | -0.011 | Destabilizing | 0.995 | D | 0.597 | neutral | None | None | None | None | N |
E/N | 0.144 | likely_benign | 0.1769 | benign | 0.037 | Stabilizing | 0.809 | D | 0.541 | neutral | None | None | None | None | N |
E/P | 0.3186 | likely_benign | 0.4013 | ambiguous | 0.084 | Stabilizing | 0.945 | D | 0.553 | neutral | None | None | None | None | N |
E/Q | 0.148 | likely_benign | 0.1761 | benign | 0.074 | Stabilizing | 0.864 | D | 0.526 | neutral | N | 0.517230795 | None | None | N |
E/R | 0.2373 | likely_benign | 0.2981 | benign | 0.605 | Stabilizing | 0.894 | D | 0.584 | neutral | None | None | None | None | N |
E/S | 0.1391 | likely_benign | 0.166 | benign | -0.131 | Destabilizing | 0.547 | D | 0.555 | neutral | None | None | None | None | N |
E/T | 0.1317 | likely_benign | 0.1578 | benign | None | Stabilizing | 0.894 | D | 0.534 | neutral | None | None | None | None | N |
E/V | 0.1508 | likely_benign | 0.1797 | benign | 0.084 | Stabilizing | 0.928 | D | 0.569 | neutral | N | 0.472422423 | None | None | N |
E/W | 0.8006 | likely_pathogenic | 0.8473 | pathogenic | 0.015 | Stabilizing | 0.995 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/Y | 0.4785 | ambiguous | 0.5554 | ambiguous | 0.146 | Stabilizing | 0.995 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.