Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26543 | 79852;79853;79854 | chr2:178566505;178566504;178566503 | chr2:179431232;179431231;179431230 |
N2AB | 24902 | 74929;74930;74931 | chr2:178566505;178566504;178566503 | chr2:179431232;179431231;179431230 |
N2A | 23975 | 72148;72149;72150 | chr2:178566505;178566504;178566503 | chr2:179431232;179431231;179431230 |
N2B | 17478 | 52657;52658;52659 | chr2:178566505;178566504;178566503 | chr2:179431232;179431231;179431230 |
Novex-1 | 17603 | 53032;53033;53034 | chr2:178566505;178566504;178566503 | chr2:179431232;179431231;179431230 |
Novex-2 | 17670 | 53233;53234;53235 | chr2:178566505;178566504;178566503 | chr2:179431232;179431231;179431230 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1237559508 | -1.677 | 0.995 | D | 0.785 | 0.508 | 0.790206724357 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/P | rs1237559508 | -1.677 | 0.995 | D | 0.785 | 0.508 | 0.790206724357 | gnomAD-4.0.0 | 3.18385E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71775E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4639 | ambiguous | 0.5251 | ambiguous | -1.917 | Destabilizing | 0.825 | D | 0.616 | neutral | None | None | None | None | N |
L/C | 0.5125 | ambiguous | 0.5741 | pathogenic | -1.15 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/D | 0.8888 | likely_pathogenic | 0.9173 | pathogenic | -1.97 | Destabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | N |
L/E | 0.6114 | likely_pathogenic | 0.6499 | pathogenic | -1.691 | Destabilizing | 0.996 | D | 0.78 | deleterious | None | None | None | None | N |
L/F | 0.2028 | likely_benign | 0.2263 | benign | -0.992 | Destabilizing | 0.976 | D | 0.688 | prob.neutral | None | None | None | None | N |
L/G | 0.7239 | likely_pathogenic | 0.7944 | pathogenic | -2.504 | Highly Destabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | N |
L/H | 0.4088 | ambiguous | 0.446 | ambiguous | -2.138 | Highly Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
L/I | 0.0878 | likely_benign | 0.093 | benign | -0.211 | Destabilizing | 0.015 | N | 0.228 | neutral | None | None | None | None | N |
L/K | 0.4846 | ambiguous | 0.5231 | ambiguous | -1.165 | Destabilizing | 0.988 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/M | 0.1437 | likely_benign | 0.1524 | benign | -0.339 | Destabilizing | 0.968 | D | 0.701 | prob.neutral | N | 0.495006448 | None | None | N |
L/N | 0.5971 | likely_pathogenic | 0.6549 | pathogenic | -1.619 | Destabilizing | 0.996 | D | 0.796 | deleterious | None | None | None | None | N |
L/P | 0.762 | likely_pathogenic | 0.8186 | pathogenic | -0.761 | Destabilizing | 0.995 | D | 0.785 | deleterious | D | 0.523231261 | None | None | N |
L/Q | 0.2851 | likely_benign | 0.3162 | benign | -1.34 | Destabilizing | 0.995 | D | 0.739 | prob.delet. | N | 0.480002838 | None | None | N |
L/R | 0.4179 | ambiguous | 0.4582 | ambiguous | -1.253 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | N | 0.485163718 | None | None | N |
L/S | 0.534 | ambiguous | 0.59 | pathogenic | -2.336 | Highly Destabilizing | 0.988 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/T | 0.4175 | ambiguous | 0.4699 | ambiguous | -1.89 | Destabilizing | 0.919 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/V | 0.1019 | likely_benign | 0.1128 | benign | -0.761 | Destabilizing | 0.046 | N | 0.257 | neutral | N | 0.430958605 | None | None | N |
L/W | 0.4072 | ambiguous | 0.4448 | ambiguous | -1.387 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
L/Y | 0.4961 | ambiguous | 0.5461 | ambiguous | -1.011 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.