Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26546 | 79861;79862;79863 | chr2:178566496;178566495;178566494 | chr2:179431223;179431222;179431221 |
N2AB | 24905 | 74938;74939;74940 | chr2:178566496;178566495;178566494 | chr2:179431223;179431222;179431221 |
N2A | 23978 | 72157;72158;72159 | chr2:178566496;178566495;178566494 | chr2:179431223;179431222;179431221 |
N2B | 17481 | 52666;52667;52668 | chr2:178566496;178566495;178566494 | chr2:179431223;179431222;179431221 |
Novex-1 | 17606 | 53041;53042;53043 | chr2:178566496;178566495;178566494 | chr2:179431223;179431222;179431221 |
Novex-2 | 17673 | 53242;53243;53244 | chr2:178566496;178566495;178566494 | chr2:179431223;179431222;179431221 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs775053902 | -0.491 | 0.928 | N | 0.522 | 0.322 | 0.181679512989 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 4.45E-05 | 0 |
T/A | rs775053902 | -0.491 | 0.928 | N | 0.522 | 0.322 | 0.181679512989 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/A | rs775053902 | -0.491 | 0.928 | N | 0.522 | 0.322 | 0.181679512989 | gnomAD-4.0.0 | 5.45432E-05 | None | None | None | None | N | None | 0 | 5.00267E-05 | None | 0 | 0 | None | 0 | 0 | 7.12058E-05 | 0 | 1.60154E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1049 | likely_benign | 0.0975 | benign | -0.723 | Destabilizing | 0.928 | D | 0.522 | neutral | N | 0.499692666 | None | None | N |
T/C | 0.27 | likely_benign | 0.2669 | benign | -0.418 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/D | 0.4782 | ambiguous | 0.4451 | ambiguous | -0.28 | Destabilizing | 0.968 | D | 0.621 | neutral | None | None | None | None | N |
T/E | 0.468 | ambiguous | 0.4291 | ambiguous | -0.154 | Destabilizing | 0.983 | D | 0.619 | neutral | None | None | None | None | N |
T/F | 0.4194 | ambiguous | 0.3936 | ambiguous | -0.768 | Destabilizing | 0.997 | D | 0.753 | deleterious | None | None | None | None | N |
T/G | 0.2133 | likely_benign | 0.2189 | benign | -1.049 | Destabilizing | 0.895 | D | 0.607 | neutral | None | None | None | None | N |
T/H | 0.2882 | likely_benign | 0.2666 | benign | -1.053 | Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | N |
T/I | 0.3874 | ambiguous | 0.3651 | ambiguous | 0.092 | Stabilizing | 0.989 | D | 0.668 | neutral | N | 0.506440616 | None | None | N |
T/K | 0.2584 | likely_benign | 0.229 | benign | -0.129 | Destabilizing | 0.968 | D | 0.625 | neutral | None | None | None | None | N |
T/L | 0.1148 | likely_benign | 0.1101 | benign | 0.092 | Stabilizing | 0.972 | D | 0.581 | neutral | None | None | None | None | N |
T/M | 0.1073 | likely_benign | 0.1021 | benign | -0.072 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/N | 0.0861 | likely_benign | 0.0775 | benign | -0.6 | Destabilizing | 0.085 | N | 0.405 | neutral | N | 0.469218148 | None | None | N |
T/P | 0.1032 | likely_benign | 0.1034 | benign | -0.149 | Destabilizing | 0.989 | D | 0.669 | neutral | N | 0.471459873 | None | None | N |
T/Q | 0.2314 | likely_benign | 0.2109 | benign | -0.471 | Destabilizing | 0.983 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/R | 0.2289 | likely_benign | 0.1968 | benign | -0.149 | Destabilizing | 0.983 | D | 0.667 | neutral | None | None | None | None | N |
T/S | 0.1104 | likely_benign | 0.1088 | benign | -0.901 | Destabilizing | 0.865 | D | 0.536 | neutral | N | 0.505426658 | None | None | N |
T/V | 0.2587 | likely_benign | 0.2438 | benign | -0.149 | Destabilizing | 0.972 | D | 0.551 | neutral | None | None | None | None | N |
T/W | 0.7397 | likely_pathogenic | 0.716 | pathogenic | -0.882 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
T/Y | 0.3871 | ambiguous | 0.3563 | ambiguous | -0.48 | Destabilizing | 0.997 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.