Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26550 | 79873;79874;79875 | chr2:178566484;178566483;178566482 | chr2:179431211;179431210;179431209 |
N2AB | 24909 | 74950;74951;74952 | chr2:178566484;178566483;178566482 | chr2:179431211;179431210;179431209 |
N2A | 23982 | 72169;72170;72171 | chr2:178566484;178566483;178566482 | chr2:179431211;179431210;179431209 |
N2B | 17485 | 52678;52679;52680 | chr2:178566484;178566483;178566482 | chr2:179431211;179431210;179431209 |
Novex-1 | 17610 | 53053;53054;53055 | chr2:178566484;178566483;178566482 | chr2:179431211;179431210;179431209 |
Novex-2 | 17677 | 53254;53255;53256 | chr2:178566484;178566483;178566482 | chr2:179431211;179431210;179431209 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.822 | N | 0.76 | 0.483 | 0.679538700149 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.815 | likely_pathogenic | 0.7962 | pathogenic | -2.07 | Highly Destabilizing | 0.754 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/C | 0.8535 | likely_pathogenic | 0.8476 | pathogenic | -1.703 | Destabilizing | 0.994 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/D | 0.9874 | likely_pathogenic | 0.9856 | pathogenic | -1.539 | Destabilizing | 0.993 | D | 0.846 | deleterious | None | None | None | None | N |
I/E | 0.9782 | likely_pathogenic | 0.9742 | pathogenic | -1.292 | Destabilizing | 0.978 | D | 0.847 | deleterious | None | None | None | None | N |
I/F | 0.2866 | likely_benign | 0.2922 | benign | -1.174 | Destabilizing | 0.942 | D | 0.759 | deleterious | N | 0.479789029 | None | None | N |
I/G | 0.9661 | likely_pathogenic | 0.9611 | pathogenic | -2.618 | Highly Destabilizing | 0.978 | D | 0.844 | deleterious | None | None | None | None | N |
I/H | 0.9546 | likely_pathogenic | 0.9518 | pathogenic | -1.97 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
I/K | 0.9421 | likely_pathogenic | 0.9396 | pathogenic | -1.436 | Destabilizing | 0.978 | D | 0.847 | deleterious | None | None | None | None | N |
I/L | 0.1569 | likely_benign | 0.1492 | benign | -0.496 | Destabilizing | 0.294 | N | 0.442 | neutral | N | 0.501871767 | None | None | N |
I/M | 0.1644 | likely_benign | 0.1659 | benign | -0.702 | Destabilizing | 0.942 | D | 0.725 | prob.delet. | N | 0.494440698 | None | None | N |
I/N | 0.8986 | likely_pathogenic | 0.8903 | pathogenic | -1.81 | Destabilizing | 0.99 | D | 0.845 | deleterious | D | 0.524408237 | None | None | N |
I/P | 0.9799 | likely_pathogenic | 0.9789 | pathogenic | -1.0 | Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
I/Q | 0.9591 | likely_pathogenic | 0.9536 | pathogenic | -1.558 | Destabilizing | 0.993 | D | 0.859 | deleterious | None | None | None | None | N |
I/R | 0.9292 | likely_pathogenic | 0.924 | pathogenic | -1.393 | Destabilizing | 0.978 | D | 0.855 | deleterious | None | None | None | None | N |
I/S | 0.9052 | likely_pathogenic | 0.8942 | pathogenic | -2.638 | Highly Destabilizing | 0.942 | D | 0.815 | deleterious | N | 0.501188648 | None | None | N |
I/T | 0.8763 | likely_pathogenic | 0.8666 | pathogenic | -2.212 | Highly Destabilizing | 0.822 | D | 0.76 | deleterious | N | 0.506050493 | None | None | N |
I/V | 0.1133 | likely_benign | 0.1056 | benign | -1.0 | Destabilizing | 0.006 | N | 0.177 | neutral | N | 0.396168454 | None | None | N |
I/W | 0.9386 | likely_pathogenic | 0.9445 | pathogenic | -1.377 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
I/Y | 0.7461 | likely_pathogenic | 0.7635 | pathogenic | -1.095 | Destabilizing | 0.978 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.