Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26553 | 79882;79883;79884 | chr2:178566475;178566474;178566473 | chr2:179431202;179431201;179431200 |
N2AB | 24912 | 74959;74960;74961 | chr2:178566475;178566474;178566473 | chr2:179431202;179431201;179431200 |
N2A | 23985 | 72178;72179;72180 | chr2:178566475;178566474;178566473 | chr2:179431202;179431201;179431200 |
N2B | 17488 | 52687;52688;52689 | chr2:178566475;178566474;178566473 | chr2:179431202;179431201;179431200 |
Novex-1 | 17613 | 53062;53063;53064 | chr2:178566475;178566474;178566473 | chr2:179431202;179431201;179431200 |
Novex-2 | 17680 | 53263;53264;53265 | chr2:178566475;178566474;178566473 | chr2:179431202;179431201;179431200 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1705907703 | None | 1.0 | D | 0.782 | 0.867 | 0.927379958638 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1705907703 | None | 1.0 | D | 0.782 | 0.867 | 0.927379958638 | gnomAD-4.0.0 | 6.57549E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47059E-05 | 0 | 0 |
L/V | None | None | 0.999 | D | 0.824 | 0.628 | 0.817017901033 | gnomAD-4.0.0 | 6.84334E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99505E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8607 | likely_pathogenic | 0.8675 | pathogenic | -2.436 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
L/C | 0.8489 | likely_pathogenic | 0.8653 | pathogenic | -2.068 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
L/D | 0.9972 | likely_pathogenic | 0.9973 | pathogenic | -1.945 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.9863 | likely_pathogenic | 0.9861 | pathogenic | -1.779 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
L/F | 0.7286 | likely_pathogenic | 0.7432 | pathogenic | -1.677 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.647331728 | None | None | N |
L/G | 0.9679 | likely_pathogenic | 0.9719 | pathogenic | -2.93 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/H | 0.9763 | likely_pathogenic | 0.9768 | pathogenic | -2.174 | Highly Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.673677057 | None | None | N |
L/I | 0.2474 | likely_benign | 0.2278 | benign | -1.047 | Destabilizing | 0.999 | D | 0.816 | deleterious | D | 0.639822096 | None | None | N |
L/K | 0.9723 | likely_pathogenic | 0.9759 | pathogenic | -1.677 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/M | 0.3233 | likely_benign | 0.3396 | benign | -1.09 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/N | 0.9815 | likely_pathogenic | 0.9821 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
L/P | 0.9755 | likely_pathogenic | 0.976 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.673677057 | None | None | N |
L/Q | 0.9473 | likely_pathogenic | 0.9499 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/R | 0.9532 | likely_pathogenic | 0.9577 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.786 | deleterious | D | 0.673677057 | None | None | N |
L/S | 0.9799 | likely_pathogenic | 0.9807 | pathogenic | -2.703 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/T | 0.8969 | likely_pathogenic | 0.8963 | pathogenic | -2.381 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/V | 0.2455 | likely_benign | 0.2355 | benign | -1.486 | Destabilizing | 0.999 | D | 0.824 | deleterious | D | 0.602089981 | None | None | N |
L/W | 0.9594 | likely_pathogenic | 0.9628 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/Y | 0.9501 | likely_pathogenic | 0.9573 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.