Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26561 | 79906;79907;79908 | chr2:178566451;178566450;178566449 | chr2:179431178;179431177;179431176 |
N2AB | 24920 | 74983;74984;74985 | chr2:178566451;178566450;178566449 | chr2:179431178;179431177;179431176 |
N2A | 23993 | 72202;72203;72204 | chr2:178566451;178566450;178566449 | chr2:179431178;179431177;179431176 |
N2B | 17496 | 52711;52712;52713 | chr2:178566451;178566450;178566449 | chr2:179431178;179431177;179431176 |
Novex-1 | 17621 | 53086;53087;53088 | chr2:178566451;178566450;178566449 | chr2:179431178;179431177;179431176 |
Novex-2 | 17688 | 53287;53288;53289 | chr2:178566451;178566450;178566449 | chr2:179431178;179431177;179431176 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs777951468 | -0.342 | None | N | 0.173 | 0.096 | 0.300784259202 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.63409E-04 | None | 0 | 0 | 0 |
I/L | rs777951468 | -0.342 | None | N | 0.173 | 0.096 | 0.300784259202 | gnomAD-4.0.0 | 5.4748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.11557E-05 | 1.65689E-05 |
I/M | rs558767363 | -0.766 | 0.171 | N | 0.617 | 0.175 | 0.380223377699 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
I/M | rs558767363 | -0.766 | 0.171 | N | 0.617 | 0.175 | 0.380223377699 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93498E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/M | rs558767363 | -0.766 | 0.171 | N | 0.617 | 0.175 | 0.380223377699 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
I/M | rs558767363 | -0.766 | 0.171 | N | 0.617 | 0.175 | 0.380223377699 | gnomAD-4.0.0 | 2.02981E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13817E-04 | None | 0 | 0 | 1.205E-06 | 0 | 0 |
I/T | rs754674270 | -2.613 | 0.012 | N | 0.646 | 0.357 | 0.585443171169 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs754674270 | -2.613 | 0.012 | N | 0.646 | 0.357 | 0.585443171169 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | N | None | 5.65867E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs777951468 | -0.974 | None | N | 0.146 | 0.077 | 0.346544149963 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/V | rs777951468 | -0.974 | None | N | 0.146 | 0.077 | 0.346544149963 | gnomAD-4.0.0 | 6.8435E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99525E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.798 | likely_pathogenic | 0.7698 | pathogenic | -2.149 | Highly Destabilizing | 0.016 | N | 0.655 | neutral | None | None | None | None | N |
I/C | 0.8243 | likely_pathogenic | 0.8281 | pathogenic | -1.321 | Destabilizing | 0.356 | N | 0.752 | deleterious | None | None | None | None | N |
I/D | 0.9964 | likely_pathogenic | 0.9964 | pathogenic | -2.652 | Highly Destabilizing | 0.356 | N | 0.813 | deleterious | None | None | None | None | N |
I/E | 0.9917 | likely_pathogenic | 0.9919 | pathogenic | -2.34 | Highly Destabilizing | 0.136 | N | 0.804 | deleterious | None | None | None | None | N |
I/F | 0.1894 | likely_benign | 0.1957 | benign | -1.273 | Destabilizing | None | N | 0.349 | neutral | None | None | None | None | N |
I/G | 0.9453 | likely_pathogenic | 0.9446 | pathogenic | -2.752 | Highly Destabilizing | 0.136 | N | 0.774 | deleterious | None | None | None | None | N |
I/H | 0.9794 | likely_pathogenic | 0.9819 | pathogenic | -2.481 | Highly Destabilizing | 0.864 | D | 0.842 | deleterious | None | None | None | None | N |
I/K | 0.9845 | likely_pathogenic | 0.9866 | pathogenic | -1.611 | Destabilizing | 0.106 | N | 0.79 | deleterious | N | 0.489187232 | None | None | N |
I/L | 0.0953 | likely_benign | 0.0836 | benign | -0.363 | Destabilizing | None | N | 0.173 | neutral | N | 0.46778341 | None | None | N |
I/M | 0.1361 | likely_benign | 0.1315 | benign | -0.387 | Destabilizing | 0.171 | N | 0.617 | neutral | N | 0.514558636 | None | None | N |
I/N | 0.9516 | likely_pathogenic | 0.9557 | pathogenic | -2.286 | Highly Destabilizing | 0.628 | D | 0.837 | deleterious | None | None | None | None | N |
I/P | 0.9855 | likely_pathogenic | 0.9837 | pathogenic | -0.945 | Destabilizing | 0.628 | D | 0.826 | deleterious | None | None | None | None | N |
I/Q | 0.9815 | likely_pathogenic | 0.9827 | pathogenic | -1.921 | Destabilizing | 0.628 | D | 0.839 | deleterious | None | None | None | None | N |
I/R | 0.9723 | likely_pathogenic | 0.9755 | pathogenic | -1.762 | Destabilizing | 0.295 | N | 0.839 | deleterious | N | 0.489187232 | None | None | N |
I/S | 0.925 | likely_pathogenic | 0.9209 | pathogenic | -2.89 | Highly Destabilizing | 0.072 | N | 0.742 | deleterious | None | None | None | None | N |
I/T | 0.8769 | likely_pathogenic | 0.8669 | pathogenic | -2.402 | Highly Destabilizing | 0.012 | N | 0.646 | neutral | N | 0.488680253 | None | None | N |
I/V | 0.1044 | likely_benign | 0.0985 | benign | -0.945 | Destabilizing | None | N | 0.146 | neutral | N | 0.417351802 | None | None | N |
I/W | 0.941 | likely_pathogenic | 0.949 | pathogenic | -1.693 | Destabilizing | 0.864 | D | 0.837 | deleterious | None | None | None | None | N |
I/Y | 0.7794 | likely_pathogenic | 0.8055 | pathogenic | -1.35 | Destabilizing | 0.038 | N | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.