Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26565 | 79918;79919;79920 | chr2:178566439;178566438;178566437 | chr2:179431166;179431165;179431164 |
N2AB | 24924 | 74995;74996;74997 | chr2:178566439;178566438;178566437 | chr2:179431166;179431165;179431164 |
N2A | 23997 | 72214;72215;72216 | chr2:178566439;178566438;178566437 | chr2:179431166;179431165;179431164 |
N2B | 17500 | 52723;52724;52725 | chr2:178566439;178566438;178566437 | chr2:179431166;179431165;179431164 |
Novex-1 | 17625 | 53098;53099;53100 | chr2:178566439;178566438;178566437 | chr2:179431166;179431165;179431164 |
Novex-2 | 17692 | 53299;53300;53301 | chr2:178566439;178566438;178566437 | chr2:179431166;179431165;179431164 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs765196786 | -0.926 | 1.0 | D | 0.716 | 0.718 | 0.70944288126 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
A/V | rs765196786 | -0.926 | 1.0 | D | 0.716 | 0.718 | 0.70944288126 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78927E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8363 | likely_pathogenic | 0.844 | pathogenic | -1.882 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
A/D | 0.9972 | likely_pathogenic | 0.9976 | pathogenic | -3.115 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.574740163 | None | None | N |
A/E | 0.9961 | likely_pathogenic | 0.9967 | pathogenic | -2.894 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/F | 0.9871 | likely_pathogenic | 0.9887 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
A/G | 0.4044 | ambiguous | 0.4861 | ambiguous | -2.215 | Highly Destabilizing | 1.0 | D | 0.64 | neutral | D | 0.546214201 | None | None | N |
A/H | 0.9957 | likely_pathogenic | 0.9961 | pathogenic | -2.251 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/I | 0.9667 | likely_pathogenic | 0.9668 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
A/K | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/L | 0.9103 | likely_pathogenic | 0.9233 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/M | 0.962 | likely_pathogenic | 0.9661 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/N | 0.9889 | likely_pathogenic | 0.9895 | pathogenic | -2.082 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/P | 0.9297 | likely_pathogenic | 0.9422 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.551355989 | None | None | N |
A/Q | 0.988 | likely_pathogenic | 0.9903 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/R | 0.9942 | likely_pathogenic | 0.9951 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/S | 0.268 | likely_benign | 0.2705 | benign | -2.452 | Highly Destabilizing | 1.0 | D | 0.634 | neutral | N | 0.514841083 | None | None | N |
A/T | 0.7745 | likely_pathogenic | 0.7395 | pathogenic | -2.12 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.55536846 | None | None | N |
A/V | 0.8565 | likely_pathogenic | 0.8491 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | D | 0.555114971 | None | None | N |
A/W | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/Y | 0.9948 | likely_pathogenic | 0.9959 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.