Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2656679921;79922;79923 chr2:178566436;178566435;178566434chr2:179431163;179431162;179431161
N2AB2492574998;74999;75000 chr2:178566436;178566435;178566434chr2:179431163;179431162;179431161
N2A2399872217;72218;72219 chr2:178566436;178566435;178566434chr2:179431163;179431162;179431161
N2B1750152726;52727;52728 chr2:178566436;178566435;178566434chr2:179431163;179431162;179431161
Novex-11762653101;53102;53103 chr2:178566436;178566435;178566434chr2:179431163;179431162;179431161
Novex-21769353302;53303;53304 chr2:178566436;178566435;178566434chr2:179431163;179431162;179431161
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Fn3-81
  • Domain position: 80
  • Structural Position: 111
  • Q(SASA): 0.1463
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I None None 0.006 N 0.186 0.074 0.236890367714 gnomAD-4.0.0 1.36872E-06 None None None None I None 0 0 None 0 0 None 1.8814E-05 0 8.9952E-07 0 0
L/P None None 0.99 N 0.773 0.533 0.843610822603 gnomAD-4.0.0 3.24087E-05 None None None None I None 0 0 None 0 0 None 0 0 3.4125E-05 0 3.66327E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2573 likely_benign 0.3019 benign -2.196 Highly Destabilizing 0.754 D 0.561 neutral None None None None I
L/C 0.3555 ambiguous 0.398 ambiguous -1.607 Destabilizing 0.998 D 0.636 neutral None None None None I
L/D 0.8246 likely_pathogenic 0.877 pathogenic -1.763 Destabilizing 0.993 D 0.77 deleterious None None None None I
L/E 0.4107 ambiguous 0.4871 ambiguous -1.656 Destabilizing 0.978 D 0.749 deleterious None None None None I
L/F 0.1092 likely_benign 0.1221 benign -1.391 Destabilizing 0.942 D 0.504 neutral N 0.492969856 None None I
L/G 0.6347 likely_pathogenic 0.7067 pathogenic -2.622 Highly Destabilizing 0.978 D 0.741 deleterious None None None None I
L/H 0.2363 likely_benign 0.2782 benign -1.817 Destabilizing 0.997 D 0.771 deleterious N 0.482272859 None None I
L/I 0.0693 likely_benign 0.0701 benign -1.028 Destabilizing 0.006 N 0.186 neutral N 0.405369514 None None I
L/K 0.2723 likely_benign 0.3246 benign -1.456 Destabilizing 0.978 D 0.702 prob.neutral None None None None I
L/M 0.0778 likely_benign 0.0831 benign -0.992 Destabilizing 0.956 D 0.535 neutral None None None None I
L/N 0.4946 ambiguous 0.5667 pathogenic -1.458 Destabilizing 0.993 D 0.773 deleterious None None None None I
L/P 0.9597 likely_pathogenic 0.9662 pathogenic -1.392 Destabilizing 0.99 D 0.773 deleterious N 0.489552399 None None I
L/Q 0.1457 likely_benign 0.1733 benign -1.523 Destabilizing 0.993 D 0.731 prob.delet. None None None None I
L/R 0.2148 likely_benign 0.2575 benign -1.009 Destabilizing 0.97 D 0.727 prob.delet. N 0.476498893 None None I
L/S 0.311 likely_benign 0.3547 ambiguous -2.222 Highly Destabilizing 0.978 D 0.655 neutral None None None None I
L/T 0.1999 likely_benign 0.23 benign -1.987 Destabilizing 0.86 D 0.573 neutral None None None None I
L/V 0.0668 likely_benign 0.0702 benign -1.392 Destabilizing 0.014 N 0.247 neutral N 0.362938527 None None I
L/W 0.2313 likely_benign 0.2737 benign -1.537 Destabilizing 0.998 D 0.713 prob.delet. None None None None I
L/Y 0.2821 likely_benign 0.3255 benign -1.3 Destabilizing 0.978 D 0.66 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.