Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26566 | 79921;79922;79923 | chr2:178566436;178566435;178566434 | chr2:179431163;179431162;179431161 |
N2AB | 24925 | 74998;74999;75000 | chr2:178566436;178566435;178566434 | chr2:179431163;179431162;179431161 |
N2A | 23998 | 72217;72218;72219 | chr2:178566436;178566435;178566434 | chr2:179431163;179431162;179431161 |
N2B | 17501 | 52726;52727;52728 | chr2:178566436;178566435;178566434 | chr2:179431163;179431162;179431161 |
Novex-1 | 17626 | 53101;53102;53103 | chr2:178566436;178566435;178566434 | chr2:179431163;179431162;179431161 |
Novex-2 | 17693 | 53302;53303;53304 | chr2:178566436;178566435;178566434 | chr2:179431163;179431162;179431161 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.006 | N | 0.186 | 0.074 | 0.236890367714 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.8814E-05 | 0 | 8.9952E-07 | 0 | 0 |
L/P | None | None | 0.99 | N | 0.773 | 0.533 | 0.843610822603 | gnomAD-4.0.0 | 3.24087E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.4125E-05 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2573 | likely_benign | 0.3019 | benign | -2.196 | Highly Destabilizing | 0.754 | D | 0.561 | neutral | None | None | None | None | I |
L/C | 0.3555 | ambiguous | 0.398 | ambiguous | -1.607 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | I |
L/D | 0.8246 | likely_pathogenic | 0.877 | pathogenic | -1.763 | Destabilizing | 0.993 | D | 0.77 | deleterious | None | None | None | None | I |
L/E | 0.4107 | ambiguous | 0.4871 | ambiguous | -1.656 | Destabilizing | 0.978 | D | 0.749 | deleterious | None | None | None | None | I |
L/F | 0.1092 | likely_benign | 0.1221 | benign | -1.391 | Destabilizing | 0.942 | D | 0.504 | neutral | N | 0.492969856 | None | None | I |
L/G | 0.6347 | likely_pathogenic | 0.7067 | pathogenic | -2.622 | Highly Destabilizing | 0.978 | D | 0.741 | deleterious | None | None | None | None | I |
L/H | 0.2363 | likely_benign | 0.2782 | benign | -1.817 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.482272859 | None | None | I |
L/I | 0.0693 | likely_benign | 0.0701 | benign | -1.028 | Destabilizing | 0.006 | N | 0.186 | neutral | N | 0.405369514 | None | None | I |
L/K | 0.2723 | likely_benign | 0.3246 | benign | -1.456 | Destabilizing | 0.978 | D | 0.702 | prob.neutral | None | None | None | None | I |
L/M | 0.0778 | likely_benign | 0.0831 | benign | -0.992 | Destabilizing | 0.956 | D | 0.535 | neutral | None | None | None | None | I |
L/N | 0.4946 | ambiguous | 0.5667 | pathogenic | -1.458 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | I |
L/P | 0.9597 | likely_pathogenic | 0.9662 | pathogenic | -1.392 | Destabilizing | 0.99 | D | 0.773 | deleterious | N | 0.489552399 | None | None | I |
L/Q | 0.1457 | likely_benign | 0.1733 | benign | -1.523 | Destabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | I |
L/R | 0.2148 | likely_benign | 0.2575 | benign | -1.009 | Destabilizing | 0.97 | D | 0.727 | prob.delet. | N | 0.476498893 | None | None | I |
L/S | 0.311 | likely_benign | 0.3547 | ambiguous | -2.222 | Highly Destabilizing | 0.978 | D | 0.655 | neutral | None | None | None | None | I |
L/T | 0.1999 | likely_benign | 0.23 | benign | -1.987 | Destabilizing | 0.86 | D | 0.573 | neutral | None | None | None | None | I |
L/V | 0.0668 | likely_benign | 0.0702 | benign | -1.392 | Destabilizing | 0.014 | N | 0.247 | neutral | N | 0.362938527 | None | None | I |
L/W | 0.2313 | likely_benign | 0.2737 | benign | -1.537 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | I |
L/Y | 0.2821 | likely_benign | 0.3255 | benign | -1.3 | Destabilizing | 0.978 | D | 0.66 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.