Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26569 | 79930;79931;79932 | chr2:178566427;178566426;178566425 | chr2:179431154;179431153;179431152 |
N2AB | 24928 | 75007;75008;75009 | chr2:178566427;178566426;178566425 | chr2:179431154;179431153;179431152 |
N2A | 24001 | 72226;72227;72228 | chr2:178566427;178566426;178566425 | chr2:179431154;179431153;179431152 |
N2B | 17504 | 52735;52736;52737 | chr2:178566427;178566426;178566425 | chr2:179431154;179431153;179431152 |
Novex-1 | 17629 | 53110;53111;53112 | chr2:178566427;178566426;178566425 | chr2:179431154;179431153;179431152 |
Novex-2 | 17696 | 53311;53312;53313 | chr2:178566427;178566426;178566425 | chr2:179431154;179431153;179431152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.123 | 0.12 | 0.170165803431 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0751 | likely_benign | 0.0847 | benign | -0.508 | Destabilizing | 0.001 | N | 0.141 | neutral | N | 0.391149423 | None | None | I |
V/C | 0.6015 | likely_pathogenic | 0.6105 | pathogenic | -0.731 | Destabilizing | 0.836 | D | 0.481 | neutral | None | None | None | None | I |
V/D | 0.4355 | ambiguous | 0.4384 | ambiguous | -0.376 | Destabilizing | 0.794 | D | 0.582 | neutral | N | 0.46584860299999997 | None | None | I |
V/E | 0.2847 | likely_benign | 0.2772 | benign | -0.498 | Destabilizing | 0.418 | N | 0.557 | neutral | None | None | None | None | I |
V/F | 0.1738 | likely_benign | 0.1627 | benign | -0.751 | Destabilizing | 0.351 | N | 0.475 | neutral | N | 0.510651539 | None | None | I |
V/G | 0.1959 | likely_benign | 0.2031 | benign | -0.615 | Destabilizing | 0.213 | N | 0.555 | neutral | N | 0.497988886 | None | None | I |
V/H | 0.5527 | ambiguous | 0.5286 | ambiguous | -0.084 | Destabilizing | 0.983 | D | 0.567 | neutral | None | None | None | None | I |
V/I | 0.0836 | likely_benign | 0.0812 | benign | -0.378 | Destabilizing | 0.001 | N | 0.124 | neutral | N | 0.447928212 | None | None | I |
V/K | 0.4537 | ambiguous | 0.4142 | ambiguous | -0.467 | Destabilizing | 0.418 | N | 0.579 | neutral | None | None | None | None | I |
V/L | 0.1954 | likely_benign | 0.1994 | benign | -0.378 | Destabilizing | None | N | 0.123 | neutral | N | 0.466764689 | None | None | I |
V/M | 0.1341 | likely_benign | 0.1317 | benign | -0.449 | Destabilizing | 0.022 | N | 0.236 | neutral | None | None | None | None | I |
V/N | 0.2768 | likely_benign | 0.2783 | benign | -0.256 | Destabilizing | 0.836 | D | 0.595 | neutral | None | None | None | None | I |
V/P | 0.7404 | likely_pathogenic | 0.7817 | pathogenic | -0.388 | Destabilizing | 0.836 | D | 0.572 | neutral | None | None | None | None | I |
V/Q | 0.3258 | likely_benign | 0.3261 | benign | -0.52 | Destabilizing | 0.836 | D | 0.585 | neutral | None | None | None | None | I |
V/R | 0.3826 | ambiguous | 0.36 | ambiguous | 0.107 | Stabilizing | 0.716 | D | 0.582 | neutral | None | None | None | None | I |
V/S | 0.1472 | likely_benign | 0.1581 | benign | -0.604 | Destabilizing | 0.264 | N | 0.503 | neutral | None | None | None | None | I |
V/T | 0.1361 | likely_benign | 0.1371 | benign | -0.628 | Destabilizing | 0.228 | N | 0.269 | neutral | None | None | None | None | I |
V/W | 0.7801 | likely_pathogenic | 0.7673 | pathogenic | -0.794 | Destabilizing | 0.983 | D | 0.567 | neutral | None | None | None | None | I |
V/Y | 0.4896 | ambiguous | 0.4831 | ambiguous | -0.515 | Destabilizing | 0.836 | D | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.