Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26571 | 79936;79937;79938 | chr2:178566421;178566420;178566419 | chr2:179431148;179431147;179431146 |
N2AB | 24930 | 75013;75014;75015 | chr2:178566421;178566420;178566419 | chr2:179431148;179431147;179431146 |
N2A | 24003 | 72232;72233;72234 | chr2:178566421;178566420;178566419 | chr2:179431148;179431147;179431146 |
N2B | 17506 | 52741;52742;52743 | chr2:178566421;178566420;178566419 | chr2:179431148;179431147;179431146 |
Novex-1 | 17631 | 53116;53117;53118 | chr2:178566421;178566420;178566419 | chr2:179431148;179431147;179431146 |
Novex-2 | 17698 | 53317;53318;53319 | chr2:178566421;178566420;178566419 | chr2:179431148;179431147;179431146 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs879058004 | None | 0.81 | N | 0.587 | 0.176 | 0.378148810121 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs879058004 | None | 0.81 | N | 0.587 | 0.176 | 0.378148810121 | gnomAD-4.0.0 | 3.8447E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18074E-06 | 0 | 0 |
L/I | None | None | 0.002 | N | 0.216 | 0.028 | 0.162503812791 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1269 | likely_benign | 0.1503 | benign | -0.831 | Destabilizing | 0.25 | N | 0.519 | neutral | None | None | None | None | I |
L/C | 0.3626 | ambiguous | 0.3946 | ambiguous | -0.763 | Destabilizing | 0.992 | D | 0.594 | neutral | None | None | None | None | I |
L/D | 0.5289 | ambiguous | 0.6183 | pathogenic | 0.145 | Stabilizing | 0.447 | N | 0.62 | neutral | None | None | None | None | I |
L/E | 0.2537 | likely_benign | 0.2919 | benign | 0.091 | Stabilizing | 0.005 | N | 0.548 | neutral | None | None | None | None | I |
L/F | 0.1051 | likely_benign | 0.114 | benign | -0.607 | Destabilizing | 0.81 | D | 0.587 | neutral | N | 0.449101648 | None | None | I |
L/G | 0.3968 | ambiguous | 0.4657 | ambiguous | -1.048 | Destabilizing | 0.617 | D | 0.621 | neutral | None | None | None | None | I |
L/H | 0.2048 | likely_benign | 0.2228 | benign | -0.163 | Destabilizing | 0.977 | D | 0.631 | neutral | None | None | None | None | I |
L/I | 0.0731 | likely_benign | 0.0679 | benign | -0.363 | Destabilizing | 0.002 | N | 0.216 | neutral | N | 0.419394817 | None | None | I |
L/K | 0.2101 | likely_benign | 0.2315 | benign | -0.382 | Destabilizing | 0.447 | N | 0.62 | neutral | None | None | None | None | I |
L/M | 0.0889 | likely_benign | 0.0905 | benign | -0.432 | Destabilizing | 0.85 | D | 0.607 | neutral | None | None | None | None | I |
L/N | 0.2967 | likely_benign | 0.3506 | ambiguous | -0.198 | Destabilizing | 0.85 | D | 0.639 | neutral | None | None | None | None | I |
L/P | 0.1348 | likely_benign | 0.16 | benign | -0.485 | Destabilizing | 0.92 | D | 0.635 | neutral | None | None | None | None | I |
L/Q | 0.1359 | likely_benign | 0.1534 | benign | -0.372 | Destabilizing | 0.739 | D | 0.632 | neutral | None | None | None | None | I |
L/R | 0.1586 | likely_benign | 0.1764 | benign | 0.149 | Stabilizing | 0.85 | D | 0.633 | neutral | None | None | None | None | I |
L/S | 0.1888 | likely_benign | 0.2212 | benign | -0.811 | Destabilizing | 0.549 | D | 0.589 | neutral | N | 0.462588234 | None | None | I |
L/T | 0.1213 | likely_benign | 0.1343 | benign | -0.744 | Destabilizing | 0.617 | D | 0.492 | neutral | None | None | None | None | I |
L/V | 0.0709 | likely_benign | 0.0693 | benign | -0.485 | Destabilizing | 0.001 | N | 0.216 | neutral | N | 0.3672352 | None | None | I |
L/W | 0.2008 | likely_benign | 0.2374 | benign | -0.587 | Destabilizing | 0.992 | D | 0.641 | neutral | None | None | None | None | I |
L/Y | 0.274 | likely_benign | 0.3016 | benign | -0.356 | Destabilizing | 0.92 | D | 0.621 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.