Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2657179936;79937;79938 chr2:178566421;178566420;178566419chr2:179431148;179431147;179431146
N2AB2493075013;75014;75015 chr2:178566421;178566420;178566419chr2:179431148;179431147;179431146
N2A2400372232;72233;72234 chr2:178566421;178566420;178566419chr2:179431148;179431147;179431146
N2B1750652741;52742;52743 chr2:178566421;178566420;178566419chr2:179431148;179431147;179431146
Novex-11763153116;53117;53118 chr2:178566421;178566420;178566419chr2:179431148;179431147;179431146
Novex-21769853317;53318;53319 chr2:178566421;178566420;178566419chr2:179431148;179431147;179431146
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTA
  • RefSeq wild type template codon: AAT
  • Domain: Fn3-81
  • Domain position: 85
  • Structural Position: 117
  • Q(SASA): 0.3537
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs879058004 None 0.81 N 0.587 0.176 0.378148810121 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/F rs879058004 None 0.81 N 0.587 0.176 0.378148810121 gnomAD-4.0.0 3.8447E-06 None None None None I None 0 0 None 0 0 None 0 0 7.18074E-06 0 0
L/I None None 0.002 N 0.216 0.028 0.162503812791 gnomAD-4.0.0 4.80129E-06 None None None None I None 0 0 None 0 0 None 0 0 5.25001E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1269 likely_benign 0.1503 benign -0.831 Destabilizing 0.25 N 0.519 neutral None None None None I
L/C 0.3626 ambiguous 0.3946 ambiguous -0.763 Destabilizing 0.992 D 0.594 neutral None None None None I
L/D 0.5289 ambiguous 0.6183 pathogenic 0.145 Stabilizing 0.447 N 0.62 neutral None None None None I
L/E 0.2537 likely_benign 0.2919 benign 0.091 Stabilizing 0.005 N 0.548 neutral None None None None I
L/F 0.1051 likely_benign 0.114 benign -0.607 Destabilizing 0.81 D 0.587 neutral N 0.449101648 None None I
L/G 0.3968 ambiguous 0.4657 ambiguous -1.048 Destabilizing 0.617 D 0.621 neutral None None None None I
L/H 0.2048 likely_benign 0.2228 benign -0.163 Destabilizing 0.977 D 0.631 neutral None None None None I
L/I 0.0731 likely_benign 0.0679 benign -0.363 Destabilizing 0.002 N 0.216 neutral N 0.419394817 None None I
L/K 0.2101 likely_benign 0.2315 benign -0.382 Destabilizing 0.447 N 0.62 neutral None None None None I
L/M 0.0889 likely_benign 0.0905 benign -0.432 Destabilizing 0.85 D 0.607 neutral None None None None I
L/N 0.2967 likely_benign 0.3506 ambiguous -0.198 Destabilizing 0.85 D 0.639 neutral None None None None I
L/P 0.1348 likely_benign 0.16 benign -0.485 Destabilizing 0.92 D 0.635 neutral None None None None I
L/Q 0.1359 likely_benign 0.1534 benign -0.372 Destabilizing 0.739 D 0.632 neutral None None None None I
L/R 0.1586 likely_benign 0.1764 benign 0.149 Stabilizing 0.85 D 0.633 neutral None None None None I
L/S 0.1888 likely_benign 0.2212 benign -0.811 Destabilizing 0.549 D 0.589 neutral N 0.462588234 None None I
L/T 0.1213 likely_benign 0.1343 benign -0.744 Destabilizing 0.617 D 0.492 neutral None None None None I
L/V 0.0709 likely_benign 0.0693 benign -0.485 Destabilizing 0.001 N 0.216 neutral N 0.3672352 None None I
L/W 0.2008 likely_benign 0.2374 benign -0.587 Destabilizing 0.992 D 0.641 neutral None None None None I
L/Y 0.274 likely_benign 0.3016 benign -0.356 Destabilizing 0.92 D 0.621 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.