Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26572 | 79939;79940;79941 | chr2:178566418;178566417;178566416 | chr2:179431145;179431144;179431143 |
N2AB | 24931 | 75016;75017;75018 | chr2:178566418;178566417;178566416 | chr2:179431145;179431144;179431143 |
N2A | 24004 | 72235;72236;72237 | chr2:178566418;178566417;178566416 | chr2:179431145;179431144;179431143 |
N2B | 17507 | 52744;52745;52746 | chr2:178566418;178566417;178566416 | chr2:179431145;179431144;179431143 |
Novex-1 | 17632 | 53119;53120;53121 | chr2:178566418;178566417;178566416 | chr2:179431145;179431144;179431143 |
Novex-2 | 17699 | 53320;53321;53322 | chr2:178566418;178566417;178566416 | chr2:179431145;179431144;179431143 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.983 | N | 0.696 | 0.531 | 0.281381271821 | gnomAD-4.0.0 | 3.18391E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86558E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.6438 | likely_pathogenic | 0.6672 | pathogenic | -0.881 | Destabilizing | 0.983 | D | 0.696 | prob.neutral | N | 0.521461133 | None | None | I |
G/C | 0.8994 | likely_pathogenic | 0.9164 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.533324418 | None | None | I |
G/D | 0.9694 | likely_pathogenic | 0.9767 | pathogenic | -1.637 | Destabilizing | 0.997 | D | 0.85 | deleterious | N | 0.520954154 | None | None | I |
G/E | 0.9791 | likely_pathogenic | 0.984 | pathogenic | -1.723 | Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | I |
G/F | 0.996 | likely_pathogenic | 0.9971 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | I |
G/H | 0.9882 | likely_pathogenic | 0.9917 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/I | 0.9931 | likely_pathogenic | 0.9952 | pathogenic | -0.61 | Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | I |
G/K | 0.9952 | likely_pathogenic | 0.9968 | pathogenic | -1.356 | Destabilizing | 0.998 | D | 0.912 | deleterious | None | None | None | None | I |
G/L | 0.9873 | likely_pathogenic | 0.9902 | pathogenic | -0.61 | Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | I |
G/M | 0.9906 | likely_pathogenic | 0.9925 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
G/N | 0.9722 | likely_pathogenic | 0.9791 | pathogenic | -1.016 | Destabilizing | 0.998 | D | 0.848 | deleterious | None | None | None | None | I |
G/P | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.917 | deleterious | None | None | None | None | I |
G/Q | 0.9834 | likely_pathogenic | 0.9876 | pathogenic | -1.296 | Destabilizing | 0.999 | D | 0.919 | deleterious | None | None | None | None | I |
G/R | 0.986 | likely_pathogenic | 0.9904 | pathogenic | -0.918 | Destabilizing | 0.997 | D | 0.923 | deleterious | N | 0.521461133 | None | None | I |
G/S | 0.2617 | likely_benign | 0.2663 | benign | -1.203 | Destabilizing | 0.778 | D | 0.641 | neutral | N | 0.43244618 | None | None | I |
G/T | 0.8606 | likely_pathogenic | 0.8843 | pathogenic | -1.233 | Destabilizing | 0.996 | D | 0.895 | deleterious | None | None | None | None | I |
G/V | 0.9814 | likely_pathogenic | 0.9857 | pathogenic | -0.663 | Destabilizing | 0.997 | D | 0.904 | deleterious | D | 0.533577907 | None | None | I |
G/W | 0.9867 | likely_pathogenic | 0.9908 | pathogenic | -1.522 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/Y | 0.9926 | likely_pathogenic | 0.995 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.