Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26574 | 79945;79946;79947 | chr2:178566412;178566411;178566410 | chr2:179431139;179431138;179431137 |
N2AB | 24933 | 75022;75023;75024 | chr2:178566412;178566411;178566410 | chr2:179431139;179431138;179431137 |
N2A | 24006 | 72241;72242;72243 | chr2:178566412;178566411;178566410 | chr2:179431139;179431138;179431137 |
N2B | 17509 | 52750;52751;52752 | chr2:178566412;178566411;178566410 | chr2:179431139;179431138;179431137 |
Novex-1 | 17634 | 53125;53126;53127 | chr2:178566412;178566411;178566410 | chr2:179431139;179431138;179431137 |
Novex-2 | 17701 | 53326;53327;53328 | chr2:178566412;178566411;178566410 | chr2:179431139;179431138;179431137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.497 | N | 0.63 | 0.319 | 0.410469974859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3862 | ambiguous | 0.4278 | ambiguous | -0.973 | Destabilizing | 0.968 | D | 0.537 | neutral | None | None | None | None | I |
A/D | 0.2556 | likely_benign | 0.3105 | benign | -1.406 | Destabilizing | 0.497 | N | 0.63 | neutral | N | 0.483779077 | None | None | I |
A/E | 0.2408 | likely_benign | 0.2872 | benign | -1.523 | Destabilizing | 0.272 | N | 0.573 | neutral | None | None | None | None | I |
A/F | 0.2665 | likely_benign | 0.2801 | benign | -1.352 | Destabilizing | 0.89 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/G | 0.1328 | likely_benign | 0.1435 | benign | -1.084 | Destabilizing | 0.22 | N | 0.539 | neutral | N | 0.468521623 | None | None | I |
A/H | 0.398 | ambiguous | 0.4329 | ambiguous | -1.08 | Destabilizing | 0.968 | D | 0.715 | prob.delet. | None | None | None | None | I |
A/I | 0.268 | likely_benign | 0.2983 | benign | -0.755 | Destabilizing | 0.726 | D | 0.635 | neutral | None | None | None | None | I |
A/K | 0.5027 | ambiguous | 0.5745 | pathogenic | -1.172 | Destabilizing | 0.272 | N | 0.57 | neutral | None | None | None | None | I |
A/L | 0.2273 | likely_benign | 0.2513 | benign | -0.755 | Destabilizing | 0.272 | N | 0.561 | neutral | None | None | None | None | I |
A/M | 0.2325 | likely_benign | 0.2612 | benign | -0.533 | Destabilizing | 0.968 | D | 0.649 | neutral | None | None | None | None | I |
A/N | 0.2165 | likely_benign | 0.2674 | benign | -0.841 | Destabilizing | 0.726 | D | 0.694 | prob.neutral | None | None | None | None | I |
A/P | 0.0805 | likely_benign | 0.0794 | benign | -0.784 | Destabilizing | None | N | 0.393 | neutral | N | 0.298897331 | None | None | I |
A/Q | 0.3445 | ambiguous | 0.3818 | ambiguous | -1.182 | Destabilizing | 0.726 | D | 0.644 | neutral | None | None | None | None | I |
A/R | 0.5059 | ambiguous | 0.559 | ambiguous | -0.622 | Destabilizing | 0.726 | D | 0.635 | neutral | None | None | None | None | I |
A/S | 0.0913 | likely_benign | 0.0998 | benign | -1.064 | Destabilizing | 0.22 | N | 0.555 | neutral | N | 0.46092086 | None | None | I |
A/T | 0.1129 | likely_benign | 0.1283 | benign | -1.115 | Destabilizing | 0.22 | N | 0.508 | neutral | N | 0.472041931 | None | None | I |
A/V | 0.1492 | likely_benign | 0.1622 | benign | -0.784 | Destabilizing | 0.22 | N | 0.511 | neutral | N | 0.452903729 | None | None | I |
A/W | 0.6515 | likely_pathogenic | 0.6871 | pathogenic | -1.496 | Destabilizing | 0.968 | D | 0.752 | deleterious | None | None | None | None | I |
A/Y | 0.3374 | likely_benign | 0.3626 | ambiguous | -1.179 | Destabilizing | 0.89 | D | 0.725 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.