Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26575 | 79948;79949;79950 | chr2:178566409;178566408;178566407 | chr2:179431136;179431135;179431134 |
N2AB | 24934 | 75025;75026;75027 | chr2:178566409;178566408;178566407 | chr2:179431136;179431135;179431134 |
N2A | 24007 | 72244;72245;72246 | chr2:178566409;178566408;178566407 | chr2:179431136;179431135;179431134 |
N2B | 17510 | 52753;52754;52755 | chr2:178566409;178566408;178566407 | chr2:179431136;179431135;179431134 |
Novex-1 | 17635 | 53128;53129;53130 | chr2:178566409;178566408;178566407 | chr2:179431136;179431135;179431134 |
Novex-2 | 17702 | 53329;53330;53331 | chr2:178566409;178566408;178566407 | chr2:179431136;179431135;179431134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs1705878064 | None | 0.317 | N | 0.608 | 0.064 | 0.110078149338 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs1705878064 | None | 0.317 | N | 0.608 | 0.064 | 0.110078149338 | gnomAD-4.0.0 | 2.03E-06 | None | None | None | None | I | None | 3.49357E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0463 | likely_benign | 0.0487 | benign | -0.914 | Destabilizing | None | N | 0.278 | neutral | N | 0.353369321 | None | None | I |
T/C | 0.2819 | likely_benign | 0.2739 | benign | -0.817 | Destabilizing | 0.824 | D | 0.609 | neutral | None | None | None | None | I |
T/D | 0.3899 | ambiguous | 0.3682 | ambiguous | -1.307 | Destabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | I |
T/E | 0.3715 | ambiguous | 0.3506 | ambiguous | -1.259 | Destabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | I |
T/F | 0.2781 | likely_benign | 0.2613 | benign | -0.891 | Destabilizing | 0.555 | D | 0.622 | neutral | None | None | None | None | I |
T/G | 0.1457 | likely_benign | 0.1616 | benign | -1.207 | Destabilizing | 0.081 | N | 0.564 | neutral | None | None | None | None | I |
T/H | 0.3527 | ambiguous | 0.3309 | benign | -1.523 | Destabilizing | 0.935 | D | 0.637 | neutral | None | None | None | None | I |
T/I | 0.1408 | likely_benign | 0.1329 | benign | -0.204 | Destabilizing | 0.062 | N | 0.533 | neutral | N | 0.442065741 | None | None | I |
T/K | 0.3531 | ambiguous | 0.3314 | benign | -0.955 | Destabilizing | 0.117 | N | 0.566 | neutral | N | 0.501844763 | None | None | I |
T/L | 0.1151 | likely_benign | 0.1103 | benign | -0.204 | Destabilizing | 0.035 | N | 0.532 | neutral | None | None | None | None | I |
T/M | 0.0935 | likely_benign | 0.0915 | benign | 0.085 | Stabilizing | 0.555 | D | 0.62 | neutral | None | None | None | None | I |
T/N | 0.1256 | likely_benign | 0.1229 | benign | -1.155 | Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | I |
T/P | 0.3151 | likely_benign | 0.3292 | benign | -0.409 | Destabilizing | 0.317 | N | 0.608 | neutral | N | 0.501844763 | None | None | I |
T/Q | 0.308 | likely_benign | 0.2951 | benign | -1.319 | Destabilizing | 0.555 | D | 0.605 | neutral | None | None | None | None | I |
T/R | 0.3167 | likely_benign | 0.2906 | benign | -0.75 | Destabilizing | 0.317 | N | 0.606 | neutral | N | 0.501671405 | None | None | I |
T/S | 0.0843 | likely_benign | 0.0835 | benign | -1.313 | Destabilizing | 0.027 | N | 0.553 | neutral | N | 0.361532152 | None | None | I |
T/V | 0.0929 | likely_benign | 0.0896 | benign | -0.409 | Destabilizing | 0.001 | N | 0.283 | neutral | None | None | None | None | I |
T/W | 0.7464 | likely_pathogenic | 0.7253 | pathogenic | -0.893 | Destabilizing | 0.935 | D | 0.655 | neutral | None | None | None | None | I |
T/Y | 0.3498 | ambiguous | 0.3379 | benign | -0.609 | Destabilizing | 0.555 | D | 0.64 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.