Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26578 | 79957;79958;79959 | chr2:178566400;178566399;178566398 | chr2:179431127;179431126;179431125 |
N2AB | 24937 | 75034;75035;75036 | chr2:178566400;178566399;178566398 | chr2:179431127;179431126;179431125 |
N2A | 24010 | 72253;72254;72255 | chr2:178566400;178566399;178566398 | chr2:179431127;179431126;179431125 |
N2B | 17513 | 52762;52763;52764 | chr2:178566400;178566399;178566398 | chr2:179431127;179431126;179431125 |
Novex-1 | 17638 | 53137;53138;53139 | chr2:178566400;178566399;178566398 | chr2:179431127;179431126;179431125 |
Novex-2 | 17705 | 53338;53339;53340 | chr2:178566400;178566399;178566398 | chr2:179431127;179431126;179431125 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1286290994 | -0.746 | 0.976 | N | 0.643 | 0.321 | 0.266843984389 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/R | rs1286290994 | -0.746 | 0.976 | N | 0.643 | 0.321 | 0.266843984389 | gnomAD-4.0.0 | 3.18376E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0811 | likely_benign | 0.0776 | benign | -0.347 | Destabilizing | 0.919 | D | 0.685 | prob.delet. | N | 0.483717575 | None | None | N |
P/C | 0.4697 | ambiguous | 0.4353 | ambiguous | -0.812 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
P/D | 0.4649 | ambiguous | 0.4137 | ambiguous | -0.114 | Destabilizing | 0.883 | D | 0.739 | deleterious | None | None | None | None | N |
P/E | 0.3111 | likely_benign | 0.2748 | benign | -0.225 | Destabilizing | 0.168 | N | 0.567 | neutral | None | None | None | None | N |
P/F | 0.4012 | ambiguous | 0.3656 | ambiguous | -0.658 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
P/G | 0.3035 | likely_benign | 0.2887 | benign | -0.422 | Destabilizing | 0.968 | D | 0.706 | prob.delet. | None | None | None | None | N |
P/H | 0.2054 | likely_benign | 0.1943 | benign | -0.047 | Destabilizing | 0.997 | D | 0.703 | prob.delet. | N | 0.482097574 | None | None | N |
P/I | 0.2481 | likely_benign | 0.2388 | benign | -0.295 | Destabilizing | 0.997 | D | 0.75 | deleterious | None | None | None | None | N |
P/K | 0.3143 | likely_benign | 0.2954 | benign | -0.344 | Destabilizing | 0.883 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/L | 0.105 | likely_benign | 0.0976 | benign | -0.295 | Destabilizing | 0.976 | D | 0.691 | prob.delet. | N | 0.455418036 | None | None | N |
P/M | 0.2521 | likely_benign | 0.242 | benign | -0.517 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | None | None | None | None | N |
P/N | 0.3095 | likely_benign | 0.2857 | benign | -0.191 | Destabilizing | 0.991 | D | 0.68 | prob.neutral | None | None | None | None | N |
P/Q | 0.1656 | likely_benign | 0.1554 | benign | -0.374 | Destabilizing | 0.37 | N | 0.55 | neutral | None | None | None | None | N |
P/R | 0.2327 | likely_benign | 0.2155 | benign | 0.062 | Stabilizing | 0.976 | D | 0.643 | neutral | N | 0.481337105 | None | None | N |
P/S | 0.1267 | likely_benign | 0.1164 | benign | -0.531 | Destabilizing | 0.919 | D | 0.751 | deleterious | N | 0.472788506 | None | None | N |
P/T | 0.0958 | likely_benign | 0.0913 | benign | -0.543 | Destabilizing | 0.988 | D | 0.704 | prob.delet. | N | 0.492414416 | None | None | N |
P/V | 0.1831 | likely_benign | 0.1775 | benign | -0.283 | Destabilizing | 0.991 | D | 0.665 | prob.neutral | None | None | None | None | N |
P/W | 0.5961 | likely_pathogenic | 0.5661 | pathogenic | -0.726 | Destabilizing | 0.999 | D | 0.689 | prob.delet. | None | None | None | None | N |
P/Y | 0.4268 | ambiguous | 0.4072 | ambiguous | -0.443 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.