Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2658 | 8197;8198;8199 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
N2AB | 2658 | 8197;8198;8199 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
N2A | 2658 | 8197;8198;8199 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
N2B | 2612 | 8059;8060;8061 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
Novex-1 | 2612 | 8059;8060;8061 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
Novex-2 | 2612 | 8059;8060;8061 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
Novex-3 | 2658 | 8197;8198;8199 | chr2:178771355;178771354;178771353 | chr2:179636082;179636081;179636080 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 0.014 | N | 0.341 | 0.234 | 0.325533332567 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
H/Q | rs1158775069 | None | 0.001 | N | 0.131 | 0.058 | 0.0986583533028 | gnomAD-4.0.0 | 1.59059E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85659E-06 | 0 | 0 |
H/Y | rs1023349406 | None | 0.065 | N | 0.306 | 0.172 | 0.284150004643 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.083 | likely_benign | 0.1067 | benign | 0.204 | Stabilizing | 0.002 | N | 0.263 | neutral | None | None | None | None | N |
H/C | 0.1349 | likely_benign | 0.1543 | benign | 0.766 | Stabilizing | 0.497 | N | 0.375 | neutral | None | None | None | None | N |
H/D | 0.0967 | likely_benign | 0.1247 | benign | -0.204 | Destabilizing | 0.003 | N | 0.277 | neutral | N | 0.446789174 | None | None | N |
H/E | 0.1164 | likely_benign | 0.1447 | benign | -0.153 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | N |
H/F | 0.1948 | likely_benign | 0.2206 | benign | 1.135 | Stabilizing | 0.085 | N | 0.416 | neutral | None | None | None | None | N |
H/G | 0.1577 | likely_benign | 0.1914 | benign | -0.114 | Destabilizing | 0.008 | N | 0.295 | neutral | None | None | None | None | N |
H/I | 0.114 | likely_benign | 0.1392 | benign | 1.04 | Stabilizing | 0.085 | N | 0.479 | neutral | None | None | None | None | N |
H/K | 0.1047 | likely_benign | 0.1222 | benign | 0.146 | Stabilizing | 0.004 | N | 0.232 | neutral | None | None | None | None | N |
H/L | 0.0648 | likely_benign | 0.0744 | benign | 1.04 | Stabilizing | 0.014 | N | 0.341 | neutral | N | 0.380162884 | None | None | N |
H/M | 0.2087 | likely_benign | 0.2552 | benign | 0.746 | Stabilizing | 0.497 | N | 0.387 | neutral | None | None | None | None | N |
H/N | 0.0628 | likely_benign | 0.0757 | benign | 0.07 | Stabilizing | 0.014 | N | 0.201 | neutral | N | 0.432796477 | None | None | N |
H/P | 0.0453 | likely_benign | 0.0497 | benign | 0.786 | Stabilizing | None | N | 0.139 | neutral | N | 0.263480797 | None | None | N |
H/Q | 0.0833 | likely_benign | 0.104 | benign | 0.239 | Stabilizing | 0.001 | N | 0.131 | neutral | N | 0.414317451 | None | None | N |
H/R | 0.0695 | likely_benign | 0.0789 | benign | -0.578 | Destabilizing | None | N | 0.132 | neutral | N | 0.394473007 | None | None | N |
H/S | 0.0868 | likely_benign | 0.1051 | benign | 0.246 | Stabilizing | 0.001 | N | 0.141 | neutral | None | None | None | None | N |
H/T | 0.0944 | likely_benign | 0.126 | benign | 0.399 | Stabilizing | 0.004 | N | 0.304 | neutral | None | None | None | None | N |
H/V | 0.0925 | likely_benign | 0.1128 | benign | 0.786 | Stabilizing | 0.018 | N | 0.397 | neutral | None | None | None | None | N |
H/W | 0.3327 | likely_benign | 0.3532 | ambiguous | 1.187 | Stabilizing | 0.788 | D | 0.363 | neutral | None | None | None | None | N |
H/Y | 0.0837 | likely_benign | 0.0896 | benign | 1.376 | Stabilizing | 0.065 | N | 0.306 | neutral | N | 0.478388083 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.