Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26580 | 79963;79964;79965 | chr2:178566394;178566393;178566392 | chr2:179431121;179431120;179431119 |
N2AB | 24939 | 75040;75041;75042 | chr2:178566394;178566393;178566392 | chr2:179431121;179431120;179431119 |
N2A | 24012 | 72259;72260;72261 | chr2:178566394;178566393;178566392 | chr2:179431121;179431120;179431119 |
N2B | 17515 | 52768;52769;52770 | chr2:178566394;178566393;178566392 | chr2:179431121;179431120;179431119 |
Novex-1 | 17640 | 53143;53144;53145 | chr2:178566394;178566393;178566392 | chr2:179431121;179431120;179431119 |
Novex-2 | 17707 | 53344;53345;53346 | chr2:178566394;178566393;178566392 | chr2:179431121;179431120;179431119 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.008 | N | 0.216 | 0.118 | 0.17948927462 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0693 | likely_benign | 0.0692 | benign | -0.571 | Destabilizing | 0.104 | N | 0.326 | neutral | N | 0.479887836 | None | None | N |
T/C | 0.2871 | likely_benign | 0.2785 | benign | -0.36 | Destabilizing | 0.953 | D | 0.573 | neutral | None | None | None | None | N |
T/D | 0.32 | likely_benign | 0.292 | benign | 0.12 | Stabilizing | 0.428 | N | 0.589 | neutral | None | None | None | None | N |
T/E | 0.2587 | likely_benign | 0.2459 | benign | 0.064 | Stabilizing | 0.428 | N | 0.584 | neutral | None | None | None | None | N |
T/F | 0.1642 | likely_benign | 0.1578 | benign | -0.885 | Destabilizing | 0.724 | D | 0.665 | prob.neutral | None | None | None | None | N |
T/G | 0.2162 | likely_benign | 0.2129 | benign | -0.747 | Destabilizing | 0.428 | N | 0.602 | neutral | None | None | None | None | N |
T/H | 0.2196 | likely_benign | 0.2023 | benign | -1.022 | Destabilizing | 0.984 | D | 0.618 | neutral | None | None | None | None | N |
T/I | 0.0942 | likely_benign | 0.0922 | benign | -0.215 | Destabilizing | 0.008 | N | 0.216 | neutral | N | 0.450368834 | None | None | N |
T/K | 0.1662 | likely_benign | 0.1624 | benign | -0.535 | Destabilizing | 0.428 | N | 0.581 | neutral | None | None | None | None | N |
T/L | 0.0735 | likely_benign | 0.0714 | benign | -0.215 | Destabilizing | 0.023 | N | 0.283 | neutral | None | None | None | None | N |
T/M | 0.0772 | likely_benign | 0.073 | benign | 0.005 | Stabilizing | 0.063 | N | 0.284 | neutral | None | None | None | None | N |
T/N | 0.102 | likely_benign | 0.0939 | benign | -0.32 | Destabilizing | 0.361 | N | 0.507 | neutral | N | 0.482912286 | None | None | N |
T/P | 0.0821 | likely_benign | 0.0767 | benign | -0.303 | Destabilizing | 0.8 | D | 0.617 | neutral | N | 0.408587885 | None | None | N |
T/Q | 0.2061 | likely_benign | 0.1943 | benign | -0.55 | Destabilizing | 0.842 | D | 0.617 | neutral | None | None | None | None | N |
T/R | 0.152 | likely_benign | 0.1428 | benign | -0.248 | Destabilizing | 0.842 | D | 0.619 | neutral | None | None | None | None | N |
T/S | 0.1013 | likely_benign | 0.0959 | benign | -0.581 | Destabilizing | 0.022 | N | 0.163 | neutral | N | 0.420439675 | None | None | N |
T/V | 0.0866 | likely_benign | 0.0837 | benign | -0.303 | Destabilizing | 0.001 | N | 0.171 | neutral | None | None | None | None | N |
T/W | 0.5117 | ambiguous | 0.5104 | ambiguous | -0.829 | Destabilizing | 0.984 | D | 0.651 | prob.neutral | None | None | None | None | N |
T/Y | 0.2229 | likely_benign | 0.2208 | benign | -0.585 | Destabilizing | 0.842 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.