Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26582 | 79969;79970;79971 | chr2:178566388;178566387;178566386 | chr2:179431115;179431114;179431113 |
N2AB | 24941 | 75046;75047;75048 | chr2:178566388;178566387;178566386 | chr2:179431115;179431114;179431113 |
N2A | 24014 | 72265;72266;72267 | chr2:178566388;178566387;178566386 | chr2:179431115;179431114;179431113 |
N2B | 17517 | 52774;52775;52776 | chr2:178566388;178566387;178566386 | chr2:179431115;179431114;179431113 |
Novex-1 | 17642 | 53149;53150;53151 | chr2:178566388;178566387;178566386 | chr2:179431115;179431114;179431113 |
Novex-2 | 17709 | 53350;53351;53352 | chr2:178566388;178566387;178566386 | chr2:179431115;179431114;179431113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs775918922 | -0.427 | 0.931 | N | 0.641 | 0.307 | 0.345859378078 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.15908E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs775918922 | -0.427 | 0.931 | N | 0.641 | 0.307 | 0.345859378078 | gnomAD-4.0.0 | 6.36736E-06 | None | None | None | None | N | None | 0 | 9.14578E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | None | None | 0.964 | N | 0.612 | 0.382 | 0.45783149361 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4627 | ambiguous | 0.3896 | ambiguous | -0.698 | Destabilizing | 0.835 | D | 0.605 | neutral | None | None | None | None | N |
K/C | 0.5779 | likely_pathogenic | 0.5293 | ambiguous | -0.802 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
K/D | 0.8837 | likely_pathogenic | 0.8357 | pathogenic | -0.618 | Destabilizing | 0.947 | D | 0.63 | neutral | None | None | None | None | N |
K/E | 0.3553 | ambiguous | 0.288 | benign | -0.45 | Destabilizing | 0.792 | D | 0.499 | neutral | N | 0.497061459 | None | None | N |
K/F | 0.6921 | likely_pathogenic | 0.6234 | pathogenic | -0.087 | Destabilizing | 0.973 | D | 0.803 | deleterious | None | None | None | None | N |
K/G | 0.7025 | likely_pathogenic | 0.6311 | pathogenic | -1.129 | Destabilizing | 0.947 | D | 0.573 | neutral | None | None | None | None | N |
K/H | 0.3784 | ambiguous | 0.331 | benign | -1.421 | Destabilizing | 0.035 | N | 0.541 | neutral | None | None | None | None | N |
K/I | 0.2158 | likely_benign | 0.1855 | benign | 0.453 | Stabilizing | 0.964 | D | 0.812 | deleterious | N | 0.446558067 | None | None | N |
K/L | 0.3042 | likely_benign | 0.2586 | benign | 0.453 | Stabilizing | 0.947 | D | 0.566 | neutral | None | None | None | None | N |
K/M | 0.1861 | likely_benign | 0.1602 | benign | 0.209 | Stabilizing | 0.998 | D | 0.733 | deleterious | None | None | None | None | N |
K/N | 0.6438 | likely_pathogenic | 0.5491 | ambiguous | -0.977 | Destabilizing | 0.931 | D | 0.633 | neutral | N | 0.511492193 | None | None | N |
K/P | 0.8572 | likely_pathogenic | 0.8199 | pathogenic | 0.099 | Stabilizing | 0.991 | D | 0.727 | deleterious | None | None | None | None | N |
K/Q | 0.1627 | likely_benign | 0.1436 | benign | -0.901 | Destabilizing | 0.931 | D | 0.641 | neutral | N | 0.478128981 | None | None | N |
K/R | 0.0936 | likely_benign | 0.0896 | benign | -0.955 | Destabilizing | 0.792 | D | 0.569 | neutral | N | 0.491519566 | None | None | N |
K/S | 0.5892 | likely_pathogenic | 0.497 | ambiguous | -1.553 | Destabilizing | 0.835 | D | 0.619 | neutral | None | None | None | None | N |
K/T | 0.2138 | likely_benign | 0.1708 | benign | -1.164 | Destabilizing | 0.964 | D | 0.612 | neutral | N | 0.437687868 | None | None | N |
K/V | 0.2431 | likely_benign | 0.2139 | benign | 0.099 | Stabilizing | 0.973 | D | 0.733 | deleterious | None | None | None | None | N |
K/W | 0.7675 | likely_pathogenic | 0.7376 | pathogenic | -0.034 | Destabilizing | 0.998 | D | 0.725 | deleterious | None | None | None | None | N |
K/Y | 0.6075 | likely_pathogenic | 0.5651 | pathogenic | 0.252 | Stabilizing | 0.899 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.