Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26585 | 79978;79979;79980 | chr2:178566379;178566378;178566377 | chr2:179431106;179431105;179431104 |
N2AB | 24944 | 75055;75056;75057 | chr2:178566379;178566378;178566377 | chr2:179431106;179431105;179431104 |
N2A | 24017 | 72274;72275;72276 | chr2:178566379;178566378;178566377 | chr2:179431106;179431105;179431104 |
N2B | 17520 | 52783;52784;52785 | chr2:178566379;178566378;178566377 | chr2:179431106;179431105;179431104 |
Novex-1 | 17645 | 53158;53159;53160 | chr2:178566379;178566378;178566377 | chr2:179431106;179431105;179431104 |
Novex-2 | 17712 | 53359;53360;53361 | chr2:178566379;178566378;178566377 | chr2:179431106;179431105;179431104 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs771202190 | None | 0.964 | N | 0.582 | 0.307 | 0.390687800842 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5846 | likely_pathogenic | 0.5632 | ambiguous | -0.212 | Destabilizing | 0.792 | D | 0.431 | neutral | N | 0.516455296 | None | None | N |
D/C | 0.9121 | likely_pathogenic | 0.9079 | pathogenic | 0.229 | Stabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
D/E | 0.2009 | likely_benign | 0.1967 | benign | -0.264 | Destabilizing | 0.049 | N | 0.359 | neutral | N | 0.488420546 | None | None | N |
D/F | 0.915 | likely_pathogenic | 0.9109 | pathogenic | -0.404 | Destabilizing | 0.947 | D | 0.701 | prob.delet. | None | None | None | None | N |
D/G | 0.6384 | likely_pathogenic | 0.6198 | pathogenic | -0.37 | Destabilizing | 0.886 | D | 0.584 | neutral | N | 0.509330447 | None | None | N |
D/H | 0.8308 | likely_pathogenic | 0.8297 | pathogenic | -0.304 | Destabilizing | 0.997 | D | 0.513 | neutral | N | 0.511865342 | None | None | N |
D/I | 0.7592 | likely_pathogenic | 0.7471 | pathogenic | 0.144 | Stabilizing | 0.078 | N | 0.579 | neutral | None | None | None | None | N |
D/K | 0.8793 | likely_pathogenic | 0.8731 | pathogenic | 0.379 | Stabilizing | 0.947 | D | 0.547 | neutral | None | None | None | None | N |
D/L | 0.7715 | likely_pathogenic | 0.7692 | pathogenic | 0.144 | Stabilizing | 0.466 | N | 0.471 | neutral | None | None | None | None | N |
D/M | 0.8807 | likely_pathogenic | 0.8803 | pathogenic | 0.366 | Stabilizing | 0.985 | D | 0.685 | prob.delet. | None | None | None | None | N |
D/N | 0.2995 | likely_benign | 0.2932 | benign | 0.251 | Stabilizing | 0.964 | D | 0.582 | neutral | N | 0.50619823 | None | None | N |
D/P | 0.936 | likely_pathogenic | 0.9318 | pathogenic | 0.047 | Stabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | N |
D/Q | 0.7767 | likely_pathogenic | 0.7716 | pathogenic | 0.248 | Stabilizing | 0.947 | D | 0.587 | neutral | None | None | None | None | N |
D/R | 0.9126 | likely_pathogenic | 0.9085 | pathogenic | 0.424 | Stabilizing | 0.947 | D | 0.639 | neutral | None | None | None | None | N |
D/S | 0.5437 | ambiguous | 0.5261 | ambiguous | 0.137 | Stabilizing | 0.835 | D | 0.613 | neutral | None | None | None | None | N |
D/T | 0.7403 | likely_pathogenic | 0.7241 | pathogenic | 0.252 | Stabilizing | 0.947 | D | 0.554 | neutral | None | None | None | None | N |
D/V | 0.5622 | ambiguous | 0.539 | ambiguous | 0.047 | Stabilizing | 0.397 | N | 0.493 | neutral | N | 0.500509036 | None | None | N |
D/W | 0.9795 | likely_pathogenic | 0.9787 | pathogenic | -0.36 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
D/Y | 0.6018 | likely_pathogenic | 0.5944 | pathogenic | -0.192 | Destabilizing | 0.964 | D | 0.655 | prob.neutral | N | 0.512118831 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.