Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2659480005;80006;80007 chr2:178566352;178566351;178566350chr2:179431079;179431078;179431077
N2AB2495375082;75083;75084 chr2:178566352;178566351;178566350chr2:179431079;179431078;179431077
N2A2402672301;72302;72303 chr2:178566352;178566351;178566350chr2:179431079;179431078;179431077
N2B1752952810;52811;52812 chr2:178566352;178566351;178566350chr2:179431079;179431078;179431077
Novex-11765453185;53186;53187 chr2:178566352;178566351;178566350chr2:179431079;179431078;179431077
Novex-21772153386;53387;53388 chr2:178566352;178566351;178566350chr2:179431079;179431078;179431077
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-138
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.7992
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I rs759737599 -0.004 0.067 N 0.212 0.112 0.269558022972 gnomAD-2.1.1 5.63E-05 None None None None N None 0 3.76702E-04 None 0 0 None 0 None 0 0 1.65618E-04
L/I rs759737599 -0.004 0.067 N 0.212 0.112 0.269558022972 gnomAD-4.0.0 2.06916E-05 None None None None N None 0 2.97265E-04 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.6976 likely_pathogenic 0.6779 pathogenic -1.246 Destabilizing 0.968 D 0.623 neutral None None None None N
L/C 0.8619 likely_pathogenic 0.8562 pathogenic -0.923 Destabilizing 1.0 D 0.715 prob.delet. None None None None N
L/D 0.9791 likely_pathogenic 0.9754 pathogenic -0.347 Destabilizing 0.998 D 0.739 prob.delet. None None None None N
L/E 0.921 likely_pathogenic 0.9133 pathogenic -0.362 Destabilizing 0.998 D 0.729 prob.delet. None None None None N
L/F 0.3762 ambiguous 0.3559 ambiguous -0.874 Destabilizing 0.988 D 0.714 prob.delet. N 0.49787569 None None N
L/G 0.932 likely_pathogenic 0.9164 pathogenic -1.532 Destabilizing 0.995 D 0.713 prob.delet. None None None None N
L/H 0.856 likely_pathogenic 0.8439 pathogenic -0.749 Destabilizing 0.999 D 0.721 prob.delet. D 0.534732991 None None N
L/I 0.0861 likely_benign 0.0756 benign -0.557 Destabilizing 0.067 N 0.212 neutral N 0.496101264 None None N
L/K 0.8715 likely_pathogenic 0.8604 pathogenic -0.799 Destabilizing 0.995 D 0.689 prob.neutral None None None None N
L/M 0.1655 likely_benign 0.1661 benign -0.562 Destabilizing 0.991 D 0.677 prob.neutral None None None None N
L/N 0.9102 likely_pathogenic 0.8925 pathogenic -0.615 Destabilizing 0.998 D 0.733 prob.delet. None None None None N
L/P 0.7614 likely_pathogenic 0.7547 pathogenic -0.753 Destabilizing 0.998 D 0.734 prob.delet. N 0.51202038 None None N
L/Q 0.7983 likely_pathogenic 0.7813 pathogenic -0.748 Destabilizing 1.0 D 0.714 prob.delet. None None None None N
L/R 0.8212 likely_pathogenic 0.818 pathogenic -0.295 Destabilizing 0.998 D 0.716 prob.delet. D 0.534479502 None None N
L/S 0.872 likely_pathogenic 0.8534 pathogenic -1.237 Destabilizing 0.995 D 0.704 prob.neutral None None None None N
L/T 0.563 ambiguous 0.5413 ambiguous -1.124 Destabilizing 0.991 D 0.694 prob.neutral None None None None N
L/V 0.1344 likely_benign 0.1532 benign -0.753 Destabilizing 0.618 D 0.488 neutral N 0.508218038 None None N
L/W 0.6934 likely_pathogenic 0.6848 pathogenic -0.912 Destabilizing 1.0 D 0.726 prob.delet. None None None None N
L/Y 0.8183 likely_pathogenic 0.8091 pathogenic -0.681 Destabilizing 0.995 D 0.733 prob.delet. None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.