Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26594 | 80005;80006;80007 | chr2:178566352;178566351;178566350 | chr2:179431079;179431078;179431077 |
N2AB | 24953 | 75082;75083;75084 | chr2:178566352;178566351;178566350 | chr2:179431079;179431078;179431077 |
N2A | 24026 | 72301;72302;72303 | chr2:178566352;178566351;178566350 | chr2:179431079;179431078;179431077 |
N2B | 17529 | 52810;52811;52812 | chr2:178566352;178566351;178566350 | chr2:179431079;179431078;179431077 |
Novex-1 | 17654 | 53185;53186;53187 | chr2:178566352;178566351;178566350 | chr2:179431079;179431078;179431077 |
Novex-2 | 17721 | 53386;53387;53388 | chr2:178566352;178566351;178566350 | chr2:179431079;179431078;179431077 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs759737599 | -0.004 | 0.067 | N | 0.212 | 0.112 | 0.269558022972 | gnomAD-2.1.1 | 5.63E-05 | None | None | None | None | N | None | 0 | 3.76702E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65618E-04 |
L/I | rs759737599 | -0.004 | 0.067 | N | 0.212 | 0.112 | 0.269558022972 | gnomAD-4.0.0 | 2.06916E-05 | None | None | None | None | N | None | 0 | 2.97265E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6976 | likely_pathogenic | 0.6779 | pathogenic | -1.246 | Destabilizing | 0.968 | D | 0.623 | neutral | None | None | None | None | N |
L/C | 0.8619 | likely_pathogenic | 0.8562 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/D | 0.9791 | likely_pathogenic | 0.9754 | pathogenic | -0.347 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/E | 0.921 | likely_pathogenic | 0.9133 | pathogenic | -0.362 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/F | 0.3762 | ambiguous | 0.3559 | ambiguous | -0.874 | Destabilizing | 0.988 | D | 0.714 | prob.delet. | N | 0.49787569 | None | None | N |
L/G | 0.932 | likely_pathogenic | 0.9164 | pathogenic | -1.532 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/H | 0.856 | likely_pathogenic | 0.8439 | pathogenic | -0.749 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | D | 0.534732991 | None | None | N |
L/I | 0.0861 | likely_benign | 0.0756 | benign | -0.557 | Destabilizing | 0.067 | N | 0.212 | neutral | N | 0.496101264 | None | None | N |
L/K | 0.8715 | likely_pathogenic | 0.8604 | pathogenic | -0.799 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/M | 0.1655 | likely_benign | 0.1661 | benign | -0.562 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/N | 0.9102 | likely_pathogenic | 0.8925 | pathogenic | -0.615 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/P | 0.7614 | likely_pathogenic | 0.7547 | pathogenic | -0.753 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | N | 0.51202038 | None | None | N |
L/Q | 0.7983 | likely_pathogenic | 0.7813 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/R | 0.8212 | likely_pathogenic | 0.818 | pathogenic | -0.295 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | D | 0.534479502 | None | None | N |
L/S | 0.872 | likely_pathogenic | 0.8534 | pathogenic | -1.237 | Destabilizing | 0.995 | D | 0.704 | prob.neutral | None | None | None | None | N |
L/T | 0.563 | ambiguous | 0.5413 | ambiguous | -1.124 | Destabilizing | 0.991 | D | 0.694 | prob.neutral | None | None | None | None | N |
L/V | 0.1344 | likely_benign | 0.1532 | benign | -0.753 | Destabilizing | 0.618 | D | 0.488 | neutral | N | 0.508218038 | None | None | N |
L/W | 0.6934 | likely_pathogenic | 0.6848 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/Y | 0.8183 | likely_pathogenic | 0.8091 | pathogenic | -0.681 | Destabilizing | 0.995 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.